Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.79■■□□□ 1.88
Lin28bQ45KJ6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Lin28bQ45KJ6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Lin28bQ45KJ6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
Lin28bQ45KJ6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Lin28bQ45KJ6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Lin28bQ45KJ6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Lin28bQ45KJ6 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.65■■□□□ 1.86
Lin28bQ45KJ6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Lin28bQ45KJ6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Lin28bQ45KJ6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Lin28bQ45KJ6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.55■■□□□ 1.84
Lin28bQ45KJ6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Lin28bQ45KJ6 Gm27322-201ENSMUST00000184007 104 ntBASIC26.46■■□□□ 1.83
Lin28bQ45KJ6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Lin28bQ45KJ6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Lin28bQ45KJ6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Lin28bQ45KJ6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
Lin28bQ45KJ6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Lin28bQ45KJ6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Lin28bQ45KJ6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.34■■□□□ 1.81
Lin28bQ45KJ6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Lin28bQ45KJ6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Lin28bQ45KJ6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.27■■□□□ 1.8
Lin28bQ45KJ6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Lin28bQ45KJ6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Lin28bQ45KJ6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Lin28bQ45KJ6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Lin28bQ45KJ6 Gm24804-201ENSMUST00000174982 85 ntBASIC26.22■■□□□ 1.79
Lin28bQ45KJ6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.14■■□□□ 1.78
Lin28bQ45KJ6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
Lin28bQ45KJ6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.13■■□□□ 1.77
Lin28bQ45KJ6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Lin28bQ45KJ6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Lin28bQ45KJ6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Lin28bQ45KJ6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Lin28bQ45KJ6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Lin28bQ45KJ6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Lin28bQ45KJ6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Lin28bQ45KJ6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Lin28bQ45KJ6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Lin28bQ45KJ6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Lin28bQ45KJ6 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.95■■□□□ 1.74
Lin28bQ45KJ6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Lin28bQ45KJ6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Lin28bQ45KJ6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.89■■□□□ 1.74
Lin28bQ45KJ6 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.87■■□□□ 1.73
Lin28bQ45KJ6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Lin28bQ45KJ6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Lin28bQ45KJ6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Lin28bQ45KJ6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Lin28bQ45KJ6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Lin28bQ45KJ6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Lin28bQ45KJ6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.8■■□□□ 1.72
Lin28bQ45KJ6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Lin28bQ45KJ6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Lin28bQ45KJ6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Lin28bQ45KJ6 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.75■■□□□ 1.71
Lin28bQ45KJ6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.75■■□□□ 1.71
Lin28bQ45KJ6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Lin28bQ45KJ6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Lin28bQ45KJ6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Lin28bQ45KJ6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Lin28bQ45KJ6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Lin28bQ45KJ6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Lin28bQ45KJ6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Lin28bQ45KJ6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Lin28bQ45KJ6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Lin28bQ45KJ6 Zfp131-205ENSMUST00000223812 663 ntBASIC25.55■■□□□ 1.68
Lin28bQ45KJ6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Lin28bQ45KJ6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Lin28bQ45KJ6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.53■■□□□ 1.68
Lin28bQ45KJ6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Lin28bQ45KJ6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Lin28bQ45KJ6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Lin28bQ45KJ6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.45■■□□□ 1.66
Lin28bQ45KJ6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Lin28bQ45KJ6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Lin28bQ45KJ6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Lin28bQ45KJ6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Lin28bQ45KJ6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Lin28bQ45KJ6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Lin28bQ45KJ6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Lin28bQ45KJ6 Mipep-204ENSMUST00000225043 1548 ntBASIC25.34■■□□□ 1.65
Lin28bQ45KJ6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Lin28bQ45KJ6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.33■■□□□ 1.65
Lin28bQ45KJ6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Lin28bQ45KJ6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Lin28bQ45KJ6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Lin28bQ45KJ6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Lin28bQ45KJ6 Gm16148-201ENSMUST00000119653 893 ntBASIC25.31■■□□□ 1.64
Lin28bQ45KJ6 Peli2-204ENSMUST00000226513 1320 ntBASIC25.31■■□□□ 1.64
Lin28bQ45KJ6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Lin28bQ45KJ6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Lin28bQ45KJ6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Lin28bQ45KJ6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Lin28bQ45KJ6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Lin28bQ45KJ6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Lin28bQ45KJ6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Lin28bQ45KJ6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms