Protein–RNA interactions for Protein: Q3UPR9

Sbspon, Somatomedin-B and thrombospondin type-1 domain-containing protein, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SbsponQ3UPR9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.38■■□□□ 1.17
SbsponQ3UPR9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SbsponQ3UPR9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SbsponQ3UPR9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SbsponQ3UPR9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SbsponQ3UPR9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SbsponQ3UPR9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SbsponQ3UPR9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SbsponQ3UPR9 Zfp131-205ENSMUST00000223812 663 ntBASIC22.23■■□□□ 1.15
SbsponQ3UPR9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SbsponQ3UPR9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SbsponQ3UPR9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SbsponQ3UPR9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SbsponQ3UPR9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SbsponQ3UPR9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SbsponQ3UPR9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.14■■□□□ 1.14
SbsponQ3UPR9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SbsponQ3UPR9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.14■■□□□ 1.13
SbsponQ3UPR9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.11■■□□□ 1.13
SbsponQ3UPR9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SbsponQ3UPR9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SbsponQ3UPR9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SbsponQ3UPR9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
SbsponQ3UPR9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SbsponQ3UPR9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SbsponQ3UPR9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SbsponQ3UPR9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SbsponQ3UPR9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.98■■□□□ 1.11
SbsponQ3UPR9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.97■■□□□ 1.11
SbsponQ3UPR9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SbsponQ3UPR9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SbsponQ3UPR9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SbsponQ3UPR9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SbsponQ3UPR9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SbsponQ3UPR9 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.92■■□□□ 1.1
SbsponQ3UPR9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.91■■□□□ 1.1
SbsponQ3UPR9 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.91■■□□□ 1.1
SbsponQ3UPR9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SbsponQ3UPR9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SbsponQ3UPR9 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.87■■□□□ 1.09
SbsponQ3UPR9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SbsponQ3UPR9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SbsponQ3UPR9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SbsponQ3UPR9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SbsponQ3UPR9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SbsponQ3UPR9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SbsponQ3UPR9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SbsponQ3UPR9 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.76■■□□□ 1.07
SbsponQ3UPR9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SbsponQ3UPR9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SbsponQ3UPR9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SbsponQ3UPR9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SbsponQ3UPR9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SbsponQ3UPR9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
SbsponQ3UPR9 Gm16148-201ENSMUST00000119653 893 ntBASIC21.66■■□□□ 1.06
SbsponQ3UPR9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SbsponQ3UPR9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SbsponQ3UPR9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.65■■□□□ 1.06
SbsponQ3UPR9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SbsponQ3UPR9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.61■■□□□ 1.05
SbsponQ3UPR9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SbsponQ3UPR9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SbsponQ3UPR9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SbsponQ3UPR9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SbsponQ3UPR9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SbsponQ3UPR9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SbsponQ3UPR9 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.56■■□□□ 1.04
SbsponQ3UPR9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SbsponQ3UPR9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.52■■□□□ 1.04
SbsponQ3UPR9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SbsponQ3UPR9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.5■■□□□ 1.03
SbsponQ3UPR9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SbsponQ3UPR9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SbsponQ3UPR9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SbsponQ3UPR9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SbsponQ3UPR9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SbsponQ3UPR9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SbsponQ3UPR9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.44■■□□□ 1.02
SbsponQ3UPR9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SbsponQ3UPR9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SbsponQ3UPR9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SbsponQ3UPR9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SbsponQ3UPR9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.4■■□□□ 1.02
SbsponQ3UPR9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SbsponQ3UPR9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SbsponQ3UPR9 Peli2-204ENSMUST00000226513 1320 ntBASIC21.38■■□□□ 1.01
SbsponQ3UPR9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SbsponQ3UPR9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SbsponQ3UPR9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SbsponQ3UPR9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SbsponQ3UPR9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.34■■□□□ 1.01
SbsponQ3UPR9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.33■■□□□ 1
SbsponQ3UPR9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SbsponQ3UPR9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SbsponQ3UPR9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SbsponQ3UPR9 Gm45855-201ENSMUST00000212546 880 ntBASIC21.32■■□□□ 1
SbsponQ3UPR9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.32■■□□□ 1
SbsponQ3UPR9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SbsponQ3UPR9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SbsponQ3UPR9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms