Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cks1brtQ3UNC9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.64■□□□□ 0.73
Cks1brtQ3UNC9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cks1brtQ3UNC9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cks1brtQ3UNC9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cks1brtQ3UNC9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.6■□□□□ 0.73
Cks1brtQ3UNC9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cks1brtQ3UNC9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cks1brtQ3UNC9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cks1brtQ3UNC9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cks1brtQ3UNC9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cks1brtQ3UNC9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cks1brtQ3UNC9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cks1brtQ3UNC9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cks1brtQ3UNC9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cks1brtQ3UNC9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cks1brtQ3UNC9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cks1brtQ3UNC9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cks1brtQ3UNC9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cks1brtQ3UNC9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cks1brtQ3UNC9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cks1brtQ3UNC9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cks1brtQ3UNC9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cks1brtQ3UNC9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cks1brtQ3UNC9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cks1brtQ3UNC9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cks1brtQ3UNC9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cks1brtQ3UNC9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cks1brtQ3UNC9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cks1brtQ3UNC9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cks1brtQ3UNC9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cks1brtQ3UNC9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Cks1brtQ3UNC9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cks1brtQ3UNC9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cks1brtQ3UNC9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cks1brtQ3UNC9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cks1brtQ3UNC9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cks1brtQ3UNC9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cks1brtQ3UNC9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cks1brtQ3UNC9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.22■□□□□ 0.67
Cks1brtQ3UNC9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cks1brtQ3UNC9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.21■□□□□ 0.67
Cks1brtQ3UNC9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cks1brtQ3UNC9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.2■□□□□ 0.66
Cks1brtQ3UNC9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cks1brtQ3UNC9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cks1brtQ3UNC9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cks1brtQ3UNC9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cks1brtQ3UNC9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cks1brtQ3UNC9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Cks1brtQ3UNC9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cks1brtQ3UNC9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cks1brtQ3UNC9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cks1brtQ3UNC9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Cks1brtQ3UNC9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cks1brtQ3UNC9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cks1brtQ3UNC9 Zxda-201ENSMUST00000117281 2621 ntBASIC19.12■□□□□ 0.65
Cks1brtQ3UNC9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cks1brtQ3UNC9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cks1brtQ3UNC9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cks1brtQ3UNC9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cks1brtQ3UNC9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Cks1brtQ3UNC9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cks1brtQ3UNC9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.04■□□□□ 0.64
Cks1brtQ3UNC9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cks1brtQ3UNC9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cks1brtQ3UNC9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cks1brtQ3UNC9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cks1brtQ3UNC9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cks1brtQ3UNC9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cks1brtQ3UNC9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Cks1brtQ3UNC9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cks1brtQ3UNC9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cks1brtQ3UNC9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cks1brtQ3UNC9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cks1brtQ3UNC9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cks1brtQ3UNC9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cks1brtQ3UNC9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cks1brtQ3UNC9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cks1brtQ3UNC9 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.88■□□□□ 0.61
Cks1brtQ3UNC9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks1brtQ3UNC9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cks1brtQ3UNC9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cks1brtQ3UNC9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cks1brtQ3UNC9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cks1brtQ3UNC9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cks1brtQ3UNC9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cks1brtQ3UNC9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cks1brtQ3UNC9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cks1brtQ3UNC9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cks1brtQ3UNC9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cks1brtQ3UNC9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cks1brtQ3UNC9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.79■□□□□ 0.6
Cks1brtQ3UNC9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cks1brtQ3UNC9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.79■□□□□ 0.6
Cks1brtQ3UNC9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cks1brtQ3UNC9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Cks1brtQ3UNC9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cks1brtQ3UNC9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cks1brtQ3UNC9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms