Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.41■■□□□ 1.98
Spg11Q3UHA3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Spg11Q3UHA3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.31■■□□□ 1.96
Spg11Q3UHA3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Spg11Q3UHA3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Spg11Q3UHA3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.3■■□□□ 1.96
Spg11Q3UHA3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Spg11Q3UHA3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.28■■□□□ 1.96
Spg11Q3UHA3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.22■■□□□ 1.95
Spg11Q3UHA3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Spg11Q3UHA3 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.2■■□□□ 1.94
Spg11Q3UHA3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Spg11Q3UHA3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.15■■□□□ 1.94
Spg11Q3UHA3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.14■■□□□ 1.93
Spg11Q3UHA3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Spg11Q3UHA3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.08■■□□□ 1.93
Spg11Q3UHA3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Spg11Q3UHA3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Spg11Q3UHA3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Spg11Q3UHA3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27■■□□□ 1.91
Spg11Q3UHA3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27■■□□□ 1.91
Spg11Q3UHA3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.99■■□□□ 1.91
Spg11Q3UHA3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Spg11Q3UHA3 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.99■■□□□ 1.91
Spg11Q3UHA3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Spg11Q3UHA3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.97■■□□□ 1.91
Spg11Q3UHA3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Spg11Q3UHA3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Spg11Q3UHA3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Spg11Q3UHA3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.85■■□□□ 1.89
Spg11Q3UHA3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Spg11Q3UHA3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
Spg11Q3UHA3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Spg11Q3UHA3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Spg11Q3UHA3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.77■■□□□ 1.88
Spg11Q3UHA3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Spg11Q3UHA3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Spg11Q3UHA3 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.73■■□□□ 1.87
Spg11Q3UHA3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Spg11Q3UHA3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Spg11Q3UHA3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Spg11Q3UHA3 Gm16148-201ENSMUST00000119653 893 ntBASIC26.66■■□□□ 1.86
Spg11Q3UHA3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Spg11Q3UHA3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
Spg11Q3UHA3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Spg11Q3UHA3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Spg11Q3UHA3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Spg11Q3UHA3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Spg11Q3UHA3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.57■■□□□ 1.84
Spg11Q3UHA3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Spg11Q3UHA3 Gm45855-201ENSMUST00000212546 880 ntBASIC26.55■■□□□ 1.84
Spg11Q3UHA3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
Spg11Q3UHA3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Spg11Q3UHA3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Spg11Q3UHA3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Spg11Q3UHA3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Spg11Q3UHA3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Spg11Q3UHA3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Spg11Q3UHA3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Spg11Q3UHA3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Spg11Q3UHA3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Spg11Q3UHA3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.39■■□□□ 1.81
Spg11Q3UHA3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.39■■□□□ 1.81
Spg11Q3UHA3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
Spg11Q3UHA3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Spg11Q3UHA3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Spg11Q3UHA3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Spg11Q3UHA3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Spg11Q3UHA3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Spg11Q3UHA3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Spg11Q3UHA3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Spg11Q3UHA3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.33■■□□□ 1.81
Spg11Q3UHA3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.33■■□□□ 1.81
Spg11Q3UHA3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Spg11Q3UHA3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Spg11Q3UHA3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Spg11Q3UHA3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Spg11Q3UHA3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Spg11Q3UHA3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Spg11Q3UHA3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Spg11Q3UHA3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Spg11Q3UHA3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.18■■□□□ 1.78
Spg11Q3UHA3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Spg11Q3UHA3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Spg11Q3UHA3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Spg11Q3UHA3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Spg11Q3UHA3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Spg11Q3UHA3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Spg11Q3UHA3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Spg11Q3UHA3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Spg11Q3UHA3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
Spg11Q3UHA3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Spg11Q3UHA3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Spg11Q3UHA3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.09■■□□□ 1.77
Spg11Q3UHA3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
Spg11Q3UHA3 Gm9397-201ENSMUST00000200125 605 ntBASIC26.06■■□□□ 1.76
Spg11Q3UHA3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Spg11Q3UHA3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Spg11Q3UHA3 Peli2-204ENSMUST00000226513 1320 ntBASIC25.97■■□□□ 1.75
Spg11Q3UHA3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms