Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.41■■■■□ 3.1
Carmil3Q3UFQ8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34.37■■■■□ 3.09
Carmil3Q3UFQ8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Carmil3Q3UFQ8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Carmil3Q3UFQ8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Carmil3Q3UFQ8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Carmil3Q3UFQ8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
Carmil3Q3UFQ8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC34.14■■■■□ 3.06
Carmil3Q3UFQ8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Carmil3Q3UFQ8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC34.14■■■■□ 3.06
Carmil3Q3UFQ8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Carmil3Q3UFQ8 Gm27322-201ENSMUST00000184007 104 ntBASIC34.09■■■■□ 3.05
Carmil3Q3UFQ8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC34.09■■■■□ 3.05
Carmil3Q3UFQ8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Carmil3Q3UFQ8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC34.05■■■■□ 3.04
Carmil3Q3UFQ8 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.04■■■■□ 3.04
Carmil3Q3UFQ8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.04■■■■□ 3.04
Carmil3Q3UFQ8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Carmil3Q3UFQ8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
Carmil3Q3UFQ8 Gm24804-201ENSMUST00000174982 85 ntBASIC33.94■■■■□ 3.02
Carmil3Q3UFQ8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.93■■■■□ 3.02
Carmil3Q3UFQ8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.89■■■■□ 3.02
Carmil3Q3UFQ8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Carmil3Q3UFQ8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC33.81■■■■□ 3
Carmil3Q3UFQ8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Carmil3Q3UFQ8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Carmil3Q3UFQ8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33.63■■■□□ 2.97
Carmil3Q3UFQ8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Carmil3Q3UFQ8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Carmil3Q3UFQ8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
Carmil3Q3UFQ8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
Carmil3Q3UFQ8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33.49■■■□□ 2.95
Carmil3Q3UFQ8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.45■■■□□ 2.95
Carmil3Q3UFQ8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Carmil3Q3UFQ8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33.42■■■□□ 2.94
Carmil3Q3UFQ8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Carmil3Q3UFQ8 AC166822.3-201ENSMUST00000227394 661 ntBASIC33.36■■■□□ 2.93
Carmil3Q3UFQ8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC33.35■■■□□ 2.93
Carmil3Q3UFQ8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC33.35■■■□□ 2.93
Carmil3Q3UFQ8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Carmil3Q3UFQ8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Carmil3Q3UFQ8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Carmil3Q3UFQ8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC33.3■■■□□ 2.92
Carmil3Q3UFQ8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Carmil3Q3UFQ8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC33.27■■■□□ 2.92
Carmil3Q3UFQ8 AL845457.1-201ENSMUST00000197244 68 ntBASIC33.27■■■□□ 2.92
Carmil3Q3UFQ8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
Carmil3Q3UFQ8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Carmil3Q3UFQ8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Carmil3Q3UFQ8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Carmil3Q3UFQ8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Carmil3Q3UFQ8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Carmil3Q3UFQ8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.22■■■□□ 2.91
Carmil3Q3UFQ8 Zfp131-205ENSMUST00000223812 663 ntBASIC33.21■■■□□ 2.91
Carmil3Q3UFQ8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Carmil3Q3UFQ8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Carmil3Q3UFQ8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
Carmil3Q3UFQ8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.08■■■□□ 2.89
Carmil3Q3UFQ8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC33.08■■■□□ 2.89
Carmil3Q3UFQ8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Carmil3Q3UFQ8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Carmil3Q3UFQ8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
Carmil3Q3UFQ8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Carmil3Q3UFQ8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Carmil3Q3UFQ8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Carmil3Q3UFQ8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
Carmil3Q3UFQ8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Carmil3Q3UFQ8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Carmil3Q3UFQ8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Carmil3Q3UFQ8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Carmil3Q3UFQ8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Carmil3Q3UFQ8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Carmil3Q3UFQ8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
Carmil3Q3UFQ8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.83■■■□□ 2.85
Carmil3Q3UFQ8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
Carmil3Q3UFQ8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Carmil3Q3UFQ8 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.79■■■□□ 2.84
Carmil3Q3UFQ8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Carmil3Q3UFQ8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
Carmil3Q3UFQ8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
Carmil3Q3UFQ8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.73■■■□□ 2.83
Carmil3Q3UFQ8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Carmil3Q3UFQ8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Carmil3Q3UFQ8 Gm16148-201ENSMUST00000119653 893 ntBASIC32.67■■■□□ 2.82
Carmil3Q3UFQ8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Carmil3Q3UFQ8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
Carmil3Q3UFQ8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Carmil3Q3UFQ8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Carmil3Q3UFQ8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32.57■■■□□ 2.8
Carmil3Q3UFQ8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Carmil3Q3UFQ8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Carmil3Q3UFQ8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Carmil3Q3UFQ8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Carmil3Q3UFQ8 Peli2-204ENSMUST00000226513 1320 ntBASIC32.51■■■□□ 2.8
Carmil3Q3UFQ8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
Carmil3Q3UFQ8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Carmil3Q3UFQ8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Carmil3Q3UFQ8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Carmil3Q3UFQ8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Carmil3Q3UFQ8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.45■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 1300 ms