Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34,41■■■■□ 3,1
Carmil3Q3UFQ8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34,37■■■■□ 3,09
Carmil3Q3UFQ8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34,36■■■■□ 3,09
Carmil3Q3UFQ8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,3■■■■□ 3,08
Carmil3Q3UFQ8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34,22■■■■□ 3,07
Carmil3Q3UFQ8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC34,19■■■■□ 3,06
Carmil3Q3UFQ8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34,18■■■■□ 3,06
Carmil3Q3UFQ8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC34,14■■■■□ 3,06
Carmil3Q3UFQ8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC34,14■■■■□ 3,06
Carmil3Q3UFQ8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC34,14■■■■□ 3,06
Carmil3Q3UFQ8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34,11■■■■□ 3,05
Carmil3Q3UFQ8 Gm27322-201ENSMUST00000184007 104 ntBASIC34,09■■■■□ 3,05
Carmil3Q3UFQ8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC34,09■■■■□ 3,05
Carmil3Q3UFQ8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34,06■■■■□ 3,04
Carmil3Q3UFQ8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC34,05■■■■□ 3,04
Carmil3Q3UFQ8 Gm42596-201ENSMUST00000196305 1958 ntBASIC34,04■■■■□ 3,04
Carmil3Q3UFQ8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34,04■■■■□ 3,04
Carmil3Q3UFQ8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33,95■■■■□ 3,03
Carmil3Q3UFQ8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33,94■■■■□ 3,02
Carmil3Q3UFQ8 Gm24804-201ENSMUST00000174982 85 ntBASIC33,94■■■■□ 3,02
Carmil3Q3UFQ8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33,93■■■■□ 3,02
Carmil3Q3UFQ8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33,89■■■■□ 3,02
Carmil3Q3UFQ8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC33,85■■■■□ 3,01
Carmil3Q3UFQ8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC33,81■■■■□ 3
Carmil3Q3UFQ8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC33,75■■■□□ 2,99
Carmil3Q3UFQ8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC33,68■■■□□ 2,98
Carmil3Q3UFQ8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33,63■■■□□ 2,97
Carmil3Q3UFQ8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33,62■■■□□ 2,97
Carmil3Q3UFQ8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33,59■■■□□ 2,97
Carmil3Q3UFQ8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33,58■■■□□ 2,97
Carmil3Q3UFQ8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33,51■■■□□ 2,96
Carmil3Q3UFQ8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33,49■■■□□ 2,95
Carmil3Q3UFQ8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33,45■■■□□ 2,95
Carmil3Q3UFQ8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33,45■■■□□ 2,95
Carmil3Q3UFQ8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33,42■■■□□ 2,94
Carmil3Q3UFQ8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33,36■■■□□ 2,93
Carmil3Q3UFQ8 AC166822.3-201ENSMUST00000227394 661 ntBASIC33,36■■■□□ 2,93
Carmil3Q3UFQ8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC33,35■■■□□ 2,93
Carmil3Q3UFQ8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC33,35■■■□□ 2,93
Carmil3Q3UFQ8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC33,34■■■□□ 2,93
Carmil3Q3UFQ8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC33,34■■■□□ 2,93
Carmil3Q3UFQ8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC33,32■■■□□ 2,92
Carmil3Q3UFQ8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC33,3■■■□□ 2,92
Carmil3Q3UFQ8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33,29■■■□□ 2,92
Carmil3Q3UFQ8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC33,27■■■□□ 2,92
Carmil3Q3UFQ8 AL845457.1-201ENSMUST00000197244 68 ntBASIC33,27■■■□□ 2,92
Carmil3Q3UFQ8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC33,26■■■□□ 2,92
Carmil3Q3UFQ8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33,26■■■□□ 2,91
Carmil3Q3UFQ8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC33,24■■■□□ 2,91
Carmil3Q3UFQ8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33,24■■■□□ 2,91
Carmil3Q3UFQ8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC33,23■■■□□ 2,91
Carmil3Q3UFQ8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC33,22■■■□□ 2,91
Carmil3Q3UFQ8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33,22■■■□□ 2,91
Carmil3Q3UFQ8 Zfp131-205ENSMUST00000223812 663 ntBASIC33,21■■■□□ 2,91
Carmil3Q3UFQ8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33,19■■■□□ 2,9
Carmil3Q3UFQ8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33,16■■■□□ 2,9
Carmil3Q3UFQ8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33,11■■■□□ 2,89
Carmil3Q3UFQ8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33,08■■■□□ 2,89
Carmil3Q3UFQ8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC33,08■■■□□ 2,89
Carmil3Q3UFQ8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC33,07■■■□□ 2,88
Carmil3Q3UFQ8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33,05■■■□□ 2,88
Carmil3Q3UFQ8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC33,01■■■□□ 2,88
Carmil3Q3UFQ8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32,97■■■□□ 2,87
Carmil3Q3UFQ8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32,95■■■□□ 2,87
Carmil3Q3UFQ8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32,94■■■□□ 2,86
Carmil3Q3UFQ8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32,93■■■□□ 2,86
Carmil3Q3UFQ8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32,91■■■□□ 2,86
Carmil3Q3UFQ8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32,91■■■□□ 2,86
Carmil3Q3UFQ8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32,89■■■□□ 2,86
Carmil3Q3UFQ8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32,88■■■□□ 2,85
Carmil3Q3UFQ8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32,86■■■□□ 2,85
Carmil3Q3UFQ8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32,85■■■□□ 2,85
Carmil3Q3UFQ8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32,84■■■□□ 2,85
Carmil3Q3UFQ8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32,83■■■□□ 2,85
Carmil3Q3UFQ8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32,82■■■□□ 2,85
Carmil3Q3UFQ8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32,79■■■□□ 2,84
Carmil3Q3UFQ8 Zfp131-207ENSMUST00000224946 1783 ntBASIC32,79■■■□□ 2,84
Carmil3Q3UFQ8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32,79■■■□□ 2,84
Carmil3Q3UFQ8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32,76■■■□□ 2,83
Carmil3Q3UFQ8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32,74■■■□□ 2,83
Carmil3Q3UFQ8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32,73■■■□□ 2,83
Carmil3Q3UFQ8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32,72■■■□□ 2,83
Carmil3Q3UFQ8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32,69■■■□□ 2,82
Carmil3Q3UFQ8 Gm16148-201ENSMUST00000119653 893 ntBASIC32,67■■■□□ 2,82
Carmil3Q3UFQ8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32,65■■■□□ 2,82
Carmil3Q3UFQ8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32,61■■■□□ 2,81
Carmil3Q3UFQ8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32,6■■■□□ 2,81
Carmil3Q3UFQ8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32,6■■■□□ 2,81
Carmil3Q3UFQ8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32,57■■■□□ 2,8
Carmil3Q3UFQ8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32,55■■■□□ 2,8
Carmil3Q3UFQ8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32,55■■■□□ 2,8
Carmil3Q3UFQ8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32,54■■■□□ 2,8
Carmil3Q3UFQ8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32,52■■■□□ 2,8
Carmil3Q3UFQ8 Peli2-204ENSMUST00000226513 1320 ntBASIC32,51■■■□□ 2,8
Carmil3Q3UFQ8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32,49■■■□□ 2,79
Carmil3Q3UFQ8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32,49■■■□□ 2,79
Carmil3Q3UFQ8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32,48■■■□□ 2,79
Carmil3Q3UFQ8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32,47■■■□□ 2,79
Carmil3Q3UFQ8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32,46■■■□□ 2,79
Carmil3Q3UFQ8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32,45■■■□□ 2,79
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms