Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Pdlim7Q3TJD7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Pdlim7Q3TJD7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pdlim7Q3TJD7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pdlim7Q3TJD7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Pdlim7Q3TJD7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pdlim7Q3TJD7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Pdlim7Q3TJD7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Pdlim7Q3TJD7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.15■■■□□ 2.74
Pdlim7Q3TJD7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Pdlim7Q3TJD7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Pdlim7Q3TJD7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Pdlim7Q3TJD7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Pdlim7Q3TJD7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Pdlim7Q3TJD7 Zfp131-205ENSMUST00000223812 663 ntBASIC32■■■□□ 2.71
Pdlim7Q3TJD7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pdlim7Q3TJD7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Pdlim7Q3TJD7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pdlim7Q3TJD7 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.91■■■□□ 2.7
Pdlim7Q3TJD7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Pdlim7Q3TJD7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pdlim7Q3TJD7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Pdlim7Q3TJD7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.86■■■□□ 2.69
Pdlim7Q3TJD7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Pdlim7Q3TJD7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Pdlim7Q3TJD7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Pdlim7Q3TJD7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.8■■■□□ 2.68
Pdlim7Q3TJD7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Pdlim7Q3TJD7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pdlim7Q3TJD7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Pdlim7Q3TJD7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.74■■■□□ 2.67
Pdlim7Q3TJD7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Pdlim7Q3TJD7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
Pdlim7Q3TJD7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Pdlim7Q3TJD7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.65■■■□□ 2.66
Pdlim7Q3TJD7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Pdlim7Q3TJD7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pdlim7Q3TJD7 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.55■■■□□ 2.64
Pdlim7Q3TJD7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pdlim7Q3TJD7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.52■■■□□ 2.64
Pdlim7Q3TJD7 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.51■■■□□ 2.63
Pdlim7Q3TJD7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Pdlim7Q3TJD7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.48■■■□□ 2.63
Pdlim7Q3TJD7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Pdlim7Q3TJD7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Pdlim7Q3TJD7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Pdlim7Q3TJD7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Pdlim7Q3TJD7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Pdlim7Q3TJD7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pdlim7Q3TJD7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Pdlim7Q3TJD7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Pdlim7Q3TJD7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Pdlim7Q3TJD7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Pdlim7Q3TJD7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Pdlim7Q3TJD7 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.27■■■□□ 2.6
Pdlim7Q3TJD7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Pdlim7Q3TJD7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Pdlim7Q3TJD7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Pdlim7Q3TJD7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pdlim7Q3TJD7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pdlim7Q3TJD7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Pdlim7Q3TJD7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.14■■■□□ 2.58
Pdlim7Q3TJD7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Pdlim7Q3TJD7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pdlim7Q3TJD7 Gm16148-201ENSMUST00000119653 893 ntBASIC31.08■■■□□ 2.57
Pdlim7Q3TJD7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.07■■■□□ 2.56
Pdlim7Q3TJD7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Pdlim7Q3TJD7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Pdlim7Q3TJD7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Pdlim7Q3TJD7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
Pdlim7Q3TJD7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.98■■■□□ 2.55
Pdlim7Q3TJD7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Pdlim7Q3TJD7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Pdlim7Q3TJD7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Pdlim7Q3TJD7 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.95■■■□□ 2.55
Pdlim7Q3TJD7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.93■■■□□ 2.54
Pdlim7Q3TJD7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Pdlim7Q3TJD7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.89■■■□□ 2.54
Pdlim7Q3TJD7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Pdlim7Q3TJD7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Pdlim7Q3TJD7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Pdlim7Q3TJD7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Pdlim7Q3TJD7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Pdlim7Q3TJD7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pdlim7Q3TJD7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pdlim7Q3TJD7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Pdlim7Q3TJD7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.75■■■□□ 2.51
Pdlim7Q3TJD7 Peli2-204ENSMUST00000226513 1320 ntBASIC30.74■■■□□ 2.51
Pdlim7Q3TJD7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.74■■■□□ 2.51
Pdlim7Q3TJD7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pdlim7Q3TJD7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pdlim7Q3TJD7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pdlim7Q3TJD7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Pdlim7Q3TJD7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
Pdlim7Q3TJD7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Pdlim7Q3TJD7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Pdlim7Q3TJD7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
Pdlim7Q3TJD7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.66■■■□□ 2.5
Pdlim7Q3TJD7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pdlim7Q3TJD7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms