Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.17■■□□□ 1.78
Khdc4Q3TCX3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Khdc4Q3TCX3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Khdc4Q3TCX3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.12■■□□□ 1.77
Khdc4Q3TCX3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.11■■□□□ 1.77
Khdc4Q3TCX3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Khdc4Q3TCX3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Khdc4Q3TCX3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Khdc4Q3TCX3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.02■■□□□ 1.76
Khdc4Q3TCX3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Khdc4Q3TCX3 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.99■■□□□ 1.75
Khdc4Q3TCX3 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.99■■□□□ 1.75
Khdc4Q3TCX3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Khdc4Q3TCX3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Khdc4Q3TCX3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Khdc4Q3TCX3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Khdc4Q3TCX3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
Khdc4Q3TCX3 Gm27322-201ENSMUST00000184007 104 ntBASIC25.85■■□□□ 1.73
Khdc4Q3TCX3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Khdc4Q3TCX3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.83■■□□□ 1.73
Khdc4Q3TCX3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Khdc4Q3TCX3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Khdc4Q3TCX3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Khdc4Q3TCX3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Khdc4Q3TCX3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Khdc4Q3TCX3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Khdc4Q3TCX3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Khdc4Q3TCX3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.73■■□□□ 1.71
Khdc4Q3TCX3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Khdc4Q3TCX3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Khdc4Q3TCX3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Khdc4Q3TCX3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Khdc4Q3TCX3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Khdc4Q3TCX3 Gm24804-201ENSMUST00000174982 85 ntBASIC25.63■■□□□ 1.69
Khdc4Q3TCX3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Khdc4Q3TCX3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Khdc4Q3TCX3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Khdc4Q3TCX3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Khdc4Q3TCX3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.53■■□□□ 1.68
Khdc4Q3TCX3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Khdc4Q3TCX3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Khdc4Q3TCX3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Khdc4Q3TCX3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.46■■□□□ 1.67
Khdc4Q3TCX3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Khdc4Q3TCX3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Khdc4Q3TCX3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Khdc4Q3TCX3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Khdc4Q3TCX3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Khdc4Q3TCX3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.42■■□□□ 1.66
Khdc4Q3TCX3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Khdc4Q3TCX3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Khdc4Q3TCX3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Khdc4Q3TCX3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Khdc4Q3TCX3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Khdc4Q3TCX3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
Khdc4Q3TCX3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Khdc4Q3TCX3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Khdc4Q3TCX3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Khdc4Q3TCX3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.24■■□□□ 1.63
Khdc4Q3TCX3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Khdc4Q3TCX3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Khdc4Q3TCX3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Khdc4Q3TCX3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Khdc4Q3TCX3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Khdc4Q3TCX3 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.2■■□□□ 1.62
Khdc4Q3TCX3 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.2■■□□□ 1.62
Khdc4Q3TCX3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Khdc4Q3TCX3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Khdc4Q3TCX3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Khdc4Q3TCX3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Khdc4Q3TCX3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Khdc4Q3TCX3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Khdc4Q3TCX3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Khdc4Q3TCX3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.1■■□□□ 1.61
Khdc4Q3TCX3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Khdc4Q3TCX3 Zfp131-205ENSMUST00000223812 663 ntBASIC25.03■■□□□ 1.6
Khdc4Q3TCX3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Khdc4Q3TCX3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Khdc4Q3TCX3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Khdc4Q3TCX3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
Khdc4Q3TCX3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Khdc4Q3TCX3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Khdc4Q3TCX3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Khdc4Q3TCX3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.93■■□□□ 1.58
Khdc4Q3TCX3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Khdc4Q3TCX3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Khdc4Q3TCX3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Khdc4Q3TCX3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Khdc4Q3TCX3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Khdc4Q3TCX3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.87■■□□□ 1.57
Khdc4Q3TCX3 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.86■■□□□ 1.57
Khdc4Q3TCX3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.85■■□□□ 1.57
Khdc4Q3TCX3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Khdc4Q3TCX3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.81■■□□□ 1.56
Khdc4Q3TCX3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Khdc4Q3TCX3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Khdc4Q3TCX3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Khdc4Q3TCX3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Khdc4Q3TCX3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Khdc4Q3TCX3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms