Protein–RNA interactions for Protein: Q3SXA2

Vmn1r11, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r11Q3SXA2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.93■■□□□ 1.58
Vmn1r11Q3SXA2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Vmn1r11Q3SXA2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.85■■□□□ 1.57
Vmn1r11Q3SXA2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Vmn1r11Q3SXA2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Vmn1r11Q3SXA2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Vmn1r11Q3SXA2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Vmn1r11Q3SXA2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.72■■□□□ 1.55
Vmn1r11Q3SXA2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Vmn1r11Q3SXA2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
Vmn1r11Q3SXA2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.69■■□□□ 1.54
Vmn1r11Q3SXA2 Rab21-202ENSMUST00000218831 843 ntBASIC24.62■■□□□ 1.53
Vmn1r11Q3SXA2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Vmn1r11Q3SXA2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Vmn1r11Q3SXA2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Vmn1r11Q3SXA2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Vmn1r11Q3SXA2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vmn1r11Q3SXA2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Vmn1r11Q3SXA2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.47■■□□□ 1.51
Vmn1r11Q3SXA2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.47■■□□□ 1.51
Vmn1r11Q3SXA2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vmn1r11Q3SXA2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Vmn1r11Q3SXA2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Vmn1r11Q3SXA2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Vmn1r11Q3SXA2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Vmn1r11Q3SXA2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Vmn1r11Q3SXA2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Vmn1r11Q3SXA2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Vmn1r11Q3SXA2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.39■■□□□ 1.5
Vmn1r11Q3SXA2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Vmn1r11Q3SXA2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Vmn1r11Q3SXA2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vmn1r11Q3SXA2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.37■■□□□ 1.49
Vmn1r11Q3SXA2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vmn1r11Q3SXA2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vmn1r11Q3SXA2 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.35■■□□□ 1.49
Vmn1r11Q3SXA2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vmn1r11Q3SXA2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Vmn1r11Q3SXA2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Vmn1r11Q3SXA2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.32■■□□□ 1.48
Vmn1r11Q3SXA2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Vmn1r11Q3SXA2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Vmn1r11Q3SXA2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Vmn1r11Q3SXA2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vmn1r11Q3SXA2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Vmn1r11Q3SXA2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Vmn1r11Q3SXA2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Vmn1r11Q3SXA2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Vmn1r11Q3SXA2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Vmn1r11Q3SXA2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Vmn1r11Q3SXA2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vmn1r11Q3SXA2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.14■■□□□ 1.45
Vmn1r11Q3SXA2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Vmn1r11Q3SXA2 Gm25262-201ENSMUST00000174934 133 ntBASIC24.13■■□□□ 1.45
Vmn1r11Q3SXA2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Vmn1r11Q3SXA2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Vmn1r11Q3SXA2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.09■■□□□ 1.45
Vmn1r11Q3SXA2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vmn1r11Q3SXA2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Vmn1r11Q3SXA2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Vmn1r11Q3SXA2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Vmn1r11Q3SXA2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Vmn1r11Q3SXA2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Vmn1r11Q3SXA2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Vmn1r11Q3SXA2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Vmn1r11Q3SXA2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Vmn1r11Q3SXA2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Vmn1r11Q3SXA2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vmn1r11Q3SXA2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Vmn1r11Q3SXA2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Vmn1r11Q3SXA2 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.84■■□□□ 1.41
Vmn1r11Q3SXA2 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.84■■□□□ 1.41
Vmn1r11Q3SXA2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Vmn1r11Q3SXA2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vmn1r11Q3SXA2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Vmn1r11Q3SXA2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Vmn1r11Q3SXA2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vmn1r11Q3SXA2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Vmn1r11Q3SXA2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.73■■□□□ 1.39
Vmn1r11Q3SXA2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vmn1r11Q3SXA2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Vmn1r11Q3SXA2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Vmn1r11Q3SXA2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.7■■□□□ 1.38
Vmn1r11Q3SXA2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.68■■□□□ 1.38
Vmn1r11Q3SXA2 Mipep-204ENSMUST00000225043 1548 ntBASIC23.67■■□□□ 1.38
Vmn1r11Q3SXA2 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.66■■□□□ 1.38
Vmn1r11Q3SXA2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Vmn1r11Q3SXA2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.62■■□□□ 1.37
Vmn1r11Q3SXA2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Vmn1r11Q3SXA2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Vmn1r11Q3SXA2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vmn1r11Q3SXA2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Vmn1r11Q3SXA2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.58■■□□□ 1.37
Vmn1r11Q3SXA2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vmn1r11Q3SXA2 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.56■■□□□ 1.36
Vmn1r11Q3SXA2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Vmn1r11Q3SXA2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Vmn1r11Q3SXA2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Vmn1r11Q3SXA2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.52■■□□□ 1.36
Vmn1r11Q3SXA2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms