Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Lhx1P63006 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
Lhx1P63006 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Lhx1P63006 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.59■■■□□ 2.01
Lhx1P63006 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Lhx1P63006 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
Lhx1P63006 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.51■■□□□ 1.99
Lhx1P63006 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Lhx1P63006 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Lhx1P63006 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Lhx1P63006 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Lhx1P63006 Gm26115-201ENSMUST00000175605 87 ntBASIC27.45■■□□□ 1.98
Lhx1P63006 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.45■■□□□ 1.98
Lhx1P63006 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Lhx1P63006 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Lhx1P63006 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Lhx1P63006 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Lhx1P63006 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Lhx1P63006 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Lhx1P63006 Gm8109-201ENSMUST00000194076 746 ntBASIC27.27■■□□□ 1.96
Lhx1P63006 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Lhx1P63006 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Lhx1P63006 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.19■■□□□ 1.94
Lhx1P63006 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.17■■□□□ 1.94
Lhx1P63006 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Lhx1P63006 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Lhx1P63006 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
Lhx1P63006 Gm27322-201ENSMUST00000184007 104 ntBASIC27.08■■□□□ 1.93
Lhx1P63006 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Lhx1P63006 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
Lhx1P63006 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Lhx1P63006 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Lhx1P63006 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Lhx1P63006 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Lhx1P63006 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.01■■□□□ 1.91
Lhx1P63006 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27■■□□□ 1.91
Lhx1P63006 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.99■■□□□ 1.91
Lhx1P63006 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Lhx1P63006 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Lhx1P63006 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Lhx1P63006 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.91■■□□□ 1.9
Lhx1P63006 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
Lhx1P63006 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.88■■□□□ 1.89
Lhx1P63006 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.84■■□□□ 1.89
Lhx1P63006 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Lhx1P63006 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.8■■□□□ 1.88
Lhx1P63006 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Lhx1P63006 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Lhx1P63006 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Lhx1P63006 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Lhx1P63006 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Lhx1P63006 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Lhx1P63006 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Lhx1P63006 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Lhx1P63006 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.68■■□□□ 1.86
Lhx1P63006 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Lhx1P63006 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.66■■□□□ 1.86
Lhx1P63006 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Lhx1P63006 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Lhx1P63006 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Lhx1P63006 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Lhx1P63006 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Lhx1P63006 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.51■■□□□ 1.83
Lhx1P63006 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Lhx1P63006 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Lhx1P63006 Gm24804-201ENSMUST00000174982 85 ntBASIC26.46■■□□□ 1.83
Lhx1P63006 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Lhx1P63006 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Lhx1P63006 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Lhx1P63006 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Lhx1P63006 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Lhx1P63006 Mipep-204ENSMUST00000225043 1548 ntBASIC26.37■■□□□ 1.81
Lhx1P63006 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Lhx1P63006 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.34■■□□□ 1.81
Lhx1P63006 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Lhx1P63006 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lhx1P63006 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lhx1P63006 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Lhx1P63006 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Lhx1P63006 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Lhx1P63006 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Lhx1P63006 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Lhx1P63006 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Lhx1P63006 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Lhx1P63006 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Lhx1P63006 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Lhx1P63006 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Lhx1P63006 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Lhx1P63006 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lhx1P63006 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Lhx1P63006 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Lhx1P63006 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Lhx1P63006 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Lhx1P63006 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Lhx1P63006 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.1■■□□□ 1.77
Lhx1P63006 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Lhx1P63006 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Lhx1P63006 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Lhx1P63006 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Lhx1P63006 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.09■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms