Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.82■■■□□ 2.84
Irf5P56477 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.77■■■□□ 2.84
Irf5P56477 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Irf5P56477 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
Irf5P56477 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Irf5P56477 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Irf5P56477 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.65■■■□□ 2.82
Irf5P56477 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.6■■■□□ 2.81
Irf5P56477 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.59■■■□□ 2.81
Irf5P56477 Gm24804-201ENSMUST00000174982 85 ntBASIC32.57■■■□□ 2.8
Irf5P56477 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
Irf5P56477 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Irf5P56477 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Irf5P56477 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Irf5P56477 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.53■■■□□ 2.8
Irf5P56477 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Irf5P56477 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Irf5P56477 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Irf5P56477 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
Irf5P56477 Gm27322-201ENSMUST00000184007 104 ntBASIC32.41■■■□□ 2.78
Irf5P56477 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Irf5P56477 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.34■■■□□ 2.77
Irf5P56477 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Irf5P56477 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Irf5P56477 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
Irf5P56477 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.26■■■□□ 2.75
Irf5P56477 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
Irf5P56477 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.26■■■□□ 2.75
Irf5P56477 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.25■■■□□ 2.75
Irf5P56477 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Irf5P56477 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Irf5P56477 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Irf5P56477 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Irf5P56477 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.11■■■□□ 2.73
Irf5P56477 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Irf5P56477 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Irf5P56477 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.02■■■□□ 2.72
Irf5P56477 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Irf5P56477 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
Irf5P56477 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Irf5P56477 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Irf5P56477 Zfp131-205ENSMUST00000223812 663 ntBASIC31.91■■■□□ 2.7
Irf5P56477 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Irf5P56477 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.88■■■□□ 2.69
Irf5P56477 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Irf5P56477 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Irf5P56477 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Irf5P56477 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Irf5P56477 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Irf5P56477 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Irf5P56477 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.72■■■□□ 2.67
Irf5P56477 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Irf5P56477 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Irf5P56477 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.69■■■□□ 2.66
Irf5P56477 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Irf5P56477 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.63■■■□□ 2.65
Irf5P56477 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Irf5P56477 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Irf5P56477 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Irf5P56477 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.58■■■□□ 2.65
Irf5P56477 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Irf5P56477 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Irf5P56477 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Irf5P56477 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
Irf5P56477 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Irf5P56477 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.5■■■□□ 2.63
Irf5P56477 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Irf5P56477 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.48■■■□□ 2.63
Irf5P56477 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Irf5P56477 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Irf5P56477 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.43■■■□□ 2.62
Irf5P56477 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Irf5P56477 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Irf5P56477 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Irf5P56477 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Irf5P56477 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Irf5P56477 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Irf5P56477 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.33■■■□□ 2.61
Irf5P56477 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.33■■■□□ 2.61
Irf5P56477 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Irf5P56477 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Irf5P56477 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Irf5P56477 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Irf5P56477 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Irf5P56477 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Irf5P56477 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Irf5P56477 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
Irf5P56477 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Irf5P56477 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Irf5P56477 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
Irf5P56477 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Irf5P56477 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Irf5P56477 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Irf5P56477 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Irf5P56477 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Irf5P56477 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Irf5P56477 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Irf5P56477 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.11■■■□□ 2.57
Irf5P56477 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Irf5P56477 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms