Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Psmc4P54775 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Psmc4P54775 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Psmc4P54775 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.06■■■□□ 2.72
Psmc4P54775 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Psmc4P54775 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Psmc4P54775 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Psmc4P54775 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Psmc4P54775 Zfp131-205ENSMUST00000223812 663 ntBASIC31.89■■■□□ 2.7
Psmc4P54775 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Psmc4P54775 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Psmc4P54775 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Psmc4P54775 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Psmc4P54775 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Psmc4P54775 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Psmc4P54775 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Psmc4P54775 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Psmc4P54775 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Psmc4P54775 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Psmc4P54775 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Psmc4P54775 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.74■■■□□ 2.67
Psmc4P54775 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.7■■■□□ 2.67
Psmc4P54775 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.69■■■□□ 2.66
Psmc4P54775 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Psmc4P54775 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Psmc4P54775 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Psmc4P54775 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Psmc4P54775 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.53■■■□□ 2.64
Psmc4P54775 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Psmc4P54775 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.47■■■□□ 2.63
Psmc4P54775 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Psmc4P54775 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Psmc4P54775 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Psmc4P54775 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Psmc4P54775 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.4■■■□□ 2.62
Psmc4P54775 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.4■■■□□ 2.62
Psmc4P54775 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Psmc4P54775 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Psmc4P54775 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
Psmc4P54775 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.37■■■□□ 2.61
Psmc4P54775 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Psmc4P54775 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Psmc4P54775 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
Psmc4P54775 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Psmc4P54775 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.31■■■□□ 2.6
Psmc4P54775 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Psmc4P54775 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Psmc4P54775 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Psmc4P54775 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Psmc4P54775 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.15■■■□□ 2.58
Psmc4P54775 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
Psmc4P54775 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Psmc4P54775 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Psmc4P54775 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.05■■■□□ 2.56
Psmc4P54775 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Psmc4P54775 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Psmc4P54775 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Psmc4P54775 Gm16148-201ENSMUST00000119653 893 ntBASIC31.03■■■□□ 2.56
Psmc4P54775 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Psmc4P54775 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.01■■■□□ 2.55
Psmc4P54775 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31■■■□□ 2.55
Psmc4P54775 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
Psmc4P54775 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Psmc4P54775 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Psmc4P54775 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Psmc4P54775 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.93■■■□□ 2.54
Psmc4P54775 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
Psmc4P54775 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Psmc4P54775 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.87■■■□□ 2.53
Psmc4P54775 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Psmc4P54775 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.84■■■□□ 2.53
Psmc4P54775 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
Psmc4P54775 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Psmc4P54775 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Psmc4P54775 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Psmc4P54775 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Psmc4P54775 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Psmc4P54775 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Psmc4P54775 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.71■■■□□ 2.51
Psmc4P54775 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Psmc4P54775 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Psmc4P54775 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Psmc4P54775 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.66■■■□□ 2.5
Psmc4P54775 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Psmc4P54775 Peli2-204ENSMUST00000226513 1320 ntBASIC30.65■■■□□ 2.5
Psmc4P54775 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Psmc4P54775 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Psmc4P54775 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Psmc4P54775 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Psmc4P54775 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Psmc4P54775 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
Psmc4P54775 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.58■■■□□ 2.49
Psmc4P54775 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Psmc4P54775 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Psmc4P54775 Gm45855-201ENSMUST00000212546 880 ntBASIC30.55■■■□□ 2.48
Psmc4P54775 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Psmc4P54775 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Psmc4P54775 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Psmc4P54775 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Psmc4P54775 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms