Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC34.38■■■■□ 3.09
Atp6v1aP50516 Gm24804-201ENSMUST00000174982 85 ntBASIC34.36■■■■□ 3.09
Atp6v1aP50516 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Atp6v1aP50516 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC34.29■■■■□ 3.08
Atp6v1aP50516 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Atp6v1aP50516 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Atp6v1aP50516 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Atp6v1aP50516 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Atp6v1aP50516 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC34.14■■■■□ 3.06
Atp6v1aP50516 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.12■■■■□ 3.05
Atp6v1aP50516 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Atp6v1aP50516 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Atp6v1aP50516 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.07■■■■□ 3.04
Atp6v1aP50516 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.06■■■■□ 3.04
Atp6v1aP50516 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Atp6v1aP50516 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Atp6v1aP50516 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
Atp6v1aP50516 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Atp6v1aP50516 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
Atp6v1aP50516 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33.85■■■■□ 3.01
Atp6v1aP50516 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Atp6v1aP50516 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC33.82■■■■□ 3
Atp6v1aP50516 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC33.76■■■□□ 2.99
Atp6v1aP50516 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Atp6v1aP50516 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Atp6v1aP50516 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33.68■■■□□ 2.98
Atp6v1aP50516 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Atp6v1aP50516 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
Atp6v1aP50516 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Atp6v1aP50516 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
Atp6v1aP50516 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33.61■■■□□ 2.97
Atp6v1aP50516 Zfp131-205ENSMUST00000223812 663 ntBASIC33.6■■■□□ 2.97
Atp6v1aP50516 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
Atp6v1aP50516 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
Atp6v1aP50516 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC33.59■■■□□ 2.97
Atp6v1aP50516 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Atp6v1aP50516 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Atp6v1aP50516 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.53■■■□□ 2.96
Atp6v1aP50516 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
Atp6v1aP50516 AC166822.3-201ENSMUST00000227394 661 ntBASIC33.51■■■□□ 2.95
Atp6v1aP50516 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Atp6v1aP50516 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
Atp6v1aP50516 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC33.44■■■□□ 2.94
Atp6v1aP50516 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Atp6v1aP50516 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Atp6v1aP50516 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Atp6v1aP50516 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC33.4■■■□□ 2.94
Atp6v1aP50516 AL845457.1-201ENSMUST00000197244 68 ntBASIC33.4■■■□□ 2.94
Atp6v1aP50516 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
Atp6v1aP50516 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
Atp6v1aP50516 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC33.3■■■□□ 2.92
Atp6v1aP50516 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Atp6v1aP50516 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Atp6v1aP50516 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC33.21■■■□□ 2.91
Atp6v1aP50516 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Atp6v1aP50516 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Atp6v1aP50516 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Atp6v1aP50516 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Atp6v1aP50516 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
Atp6v1aP50516 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
Atp6v1aP50516 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC33.08■■■□□ 2.89
Atp6v1aP50516 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC33.07■■■□□ 2.88
Atp6v1aP50516 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Atp6v1aP50516 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Atp6v1aP50516 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Atp6v1aP50516 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Atp6v1aP50516 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Atp6v1aP50516 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Atp6v1aP50516 Gm16148-201ENSMUST00000119653 893 ntBASIC32.96■■■□□ 2.87
Atp6v1aP50516 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.96■■■□□ 2.87
Atp6v1aP50516 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Atp6v1aP50516 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Atp6v1aP50516 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
Atp6v1aP50516 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Atp6v1aP50516 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.81■■■□□ 2.84
Atp6v1aP50516 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Atp6v1aP50516 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Atp6v1aP50516 Peli2-204ENSMUST00000226513 1320 ntBASIC32.73■■■□□ 2.83
Atp6v1aP50516 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Atp6v1aP50516 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.71■■■□□ 2.83
Atp6v1aP50516 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Atp6v1aP50516 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Atp6v1aP50516 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Atp6v1aP50516 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.69■■■□□ 2.82
Atp6v1aP50516 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
Atp6v1aP50516 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Atp6v1aP50516 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Atp6v1aP50516 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Atp6v1aP50516 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Atp6v1aP50516 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Atp6v1aP50516 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Atp6v1aP50516 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.6■■■□□ 2.81
Atp6v1aP50516 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Atp6v1aP50516 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.57■■■□□ 2.8
Atp6v1aP50516 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Atp6v1aP50516 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Atp6v1aP50516 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.55■■■□□ 2.8
Atp6v1aP50516 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.55■■■□□ 2.8
Atp6v1aP50516 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Atp6v1aP50516 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms