Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22,8■■□□□ 1,24
Rab3dP35276 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22,77■■□□□ 1,24
Rab3dP35276 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22,74■■□□□ 1,23
Rab3dP35276 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22,72■■□□□ 1,23
Rab3dP35276 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22,7■■□□□ 1,22
Rab3dP35276 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22,69■■□□□ 1,22
Rab3dP35276 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22,66■■□□□ 1,22
Rab3dP35276 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22,58■■□□□ 1,21
Rab3dP35276 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22,58■■□□□ 1,2
Rab3dP35276 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22,57■■□□□ 1,2
Rab3dP35276 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22,57■■□□□ 1,2
Rab3dP35276 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22,57■■□□□ 1,2
Rab3dP35276 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22,56■■□□□ 1,2
Rab3dP35276 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22,53■■□□□ 1,2
Rab3dP35276 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22,52■■□□□ 1,2
Rab3dP35276 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22,5■■□□□ 1,19
Rab3dP35276 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22,46■■□□□ 1,19
Rab3dP35276 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22,45■■□□□ 1,18
Rab3dP35276 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22,45■■□□□ 1,18
Rab3dP35276 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22,43■■□□□ 1,18
Rab3dP35276 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22,43■■□□□ 1,18
Rab3dP35276 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22,4■■□□□ 1,18
Rab3dP35276 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22,39■■□□□ 1,18
Rab3dP35276 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22,37■■□□□ 1,17
Rab3dP35276 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22,33■■□□□ 1,16
Rab3dP35276 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22,31■■□□□ 1,16
Rab3dP35276 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22,31■■□□□ 1,16
Rab3dP35276 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22,31■■□□□ 1,16
Rab3dP35276 Gm2415-204ENSMUST00000190235 2004 ntBASIC22,28■■□□□ 1,16
Rab3dP35276 Gm27325-201ENSMUST00000175467 74 ntBASIC22,22■■□□□ 1,15
Rab3dP35276 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22,2■■□□□ 1,14
Rab3dP35276 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22,2■■□□□ 1,14
Rab3dP35276 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22,15■■□□□ 1,14
Rab3dP35276 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22,14■■□□□ 1,13
Rab3dP35276 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22,13■■□□□ 1,13
Rab3dP35276 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22,1■■□□□ 1,13
Rab3dP35276 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22,1■■□□□ 1,13
Rab3dP35276 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22,1■■□□□ 1,13
Rab3dP35276 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22,1■■□□□ 1,13
Rab3dP35276 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22,09■■□□□ 1,13
Rab3dP35276 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,13
Rab3dP35276 Gm6658-202ENSMUST00000209493 1885 ntBASIC22,07■■□□□ 1,12
Rab3dP35276 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22,05■■□□□ 1,12
Rab3dP35276 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22,05■■□□□ 1,12
Rab3dP35276 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22,03■■□□□ 1,12
Rab3dP35276 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22,02■■□□□ 1,12
Rab3dP35276 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22,02■■□□□ 1,12
Rab3dP35276 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22,01■■□□□ 1,11
Rab3dP35276 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1,11
Rab3dP35276 Zfp131-207ENSMUST00000224946 1783 ntBASIC21,99■■□□□ 1,11
Rab3dP35276 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,99■■□□□ 1,11
Rab3dP35276 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21,98■■□□□ 1,11
Rab3dP35276 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21,97■■□□□ 1,11
Rab3dP35276 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21,97■■□□□ 1,11
Rab3dP35276 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21,96■■□□□ 1,11
Rab3dP35276 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21,95■■□□□ 1,1
Rab3dP35276 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21,92■■□□□ 1,1
Rab3dP35276 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21,92■■□□□ 1,1
Rab3dP35276 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21,92■■□□□ 1,1
Rab3dP35276 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21,9■■□□□ 1,1
Rab3dP35276 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21,87■■□□□ 1,09
Rab3dP35276 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21,87■■□□□ 1,09
Rab3dP35276 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21,87■■□□□ 1,09
Rab3dP35276 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21,85■■□□□ 1,09
Rab3dP35276 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21,84■■□□□ 1,09
Rab3dP35276 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21,83■■□□□ 1,09
Rab3dP35276 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21,82■■□□□ 1,08
Rab3dP35276 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21,82■■□□□ 1,08
Rab3dP35276 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21,82■■□□□ 1,08
Rab3dP35276 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21,81■■□□□ 1,08
Rab3dP35276 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21,8■■□□□ 1,08
Rab3dP35276 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21,8■■□□□ 1,08
Rab3dP35276 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21,79■■□□□ 1,08
Rab3dP35276 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21,76■■□□□ 1,07
Rab3dP35276 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21,75■■□□□ 1,07
Rab3dP35276 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21,74■■□□□ 1,07
Rab3dP35276 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21,73■■□□□ 1,07
Rab3dP35276 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21,73■■□□□ 1,07
Rab3dP35276 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21,72■■□□□ 1,07
Rab3dP35276 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21,72■■□□□ 1,07
Rab3dP35276 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21,72■■□□□ 1,07
Rab3dP35276 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21,72■■□□□ 1,07
Rab3dP35276 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21,72■■□□□ 1,07
Rab3dP35276 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21,72■■□□□ 1,07
Rab3dP35276 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21,72■■□□□ 1,07
Rab3dP35276 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21,71■■□□□ 1,07
Rab3dP35276 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21,71■■□□□ 1,07
Rab3dP35276 Gm9905-201ENSMUST00000065740 1845 ntBASIC21,71■■□□□ 1,07
Rab3dP35276 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21,71■■□□□ 1,07
Rab3dP35276 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21,7■■□□□ 1,07
Rab3dP35276 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21,7■■□□□ 1,07
Rab3dP35276 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21,7■■□□□ 1,06
Rab3dP35276 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21,67■■□□□ 1,06
Rab3dP35276 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21,64■■□□□ 1,06
Rab3dP35276 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21,64■■□□□ 1,05
Rab3dP35276 Zxda-201ENSMUST00000117281 2621 ntBASIC21,64■■□□□ 1,05
Rab3dP35276 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21,63■■□□□ 1,05
Rab3dP35276 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21,62■■□□□ 1,05
Rab3dP35276 Gm6206-201ENSMUST00000133472 2199 ntBASIC21,62■■□□□ 1,05
Rab3dP35276 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21,61■■□□□ 1,05
Retrieved 100 of 76,532 protein–RNA pairs in 17,5 ms