Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Hmgn1P18608 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25,14■■□□□ 1,61
Hmgn1P18608 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25,14■■□□□ 1,61
Hmgn1P18608 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25,1■■□□□ 1,61
Hmgn1P18608 Gm27325-201ENSMUST00000175467 74 ntBASIC25,07■■□□□ 1,6
Hmgn1P18608 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25,06■■□□□ 1,6
Hmgn1P18608 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1,59
Hmgn1P18608 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24,98■■□□□ 1,59
Hmgn1P18608 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24,97■■□□□ 1,59
Hmgn1P18608 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24,91■■□□□ 1,58
Hmgn1P18608 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24,91■■□□□ 1,58
Hmgn1P18608 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24,91■■□□□ 1,58
Hmgn1P18608 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24,9■■□□□ 1,58
Hmgn1P18608 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24,9■■□□□ 1,58
Hmgn1P18608 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24,89■■□□□ 1,57
Hmgn1P18608 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24,82■■□□□ 1,56
Hmgn1P18608 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24,8■■□□□ 1,56
Hmgn1P18608 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24,8■■□□□ 1,56
Hmgn1P18608 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24,78■■□□□ 1,56
Hmgn1P18608 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24,74■■□□□ 1,55
Hmgn1P18608 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24,72■■□□□ 1,55
Hmgn1P18608 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24,71■■□□□ 1,55
Hmgn1P18608 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24,7■■□□□ 1,54
Hmgn1P18608 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24,69■■□□□ 1,54
Hmgn1P18608 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24,65■■□□□ 1,54
Hmgn1P18608 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24,63■■□□□ 1,53
Hmgn1P18608 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24,63■■□□□ 1,53
Hmgn1P18608 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24,61■■□□□ 1,53
Hmgn1P18608 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24,6■■□□□ 1,53
Hmgn1P18608 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24,6■■□□□ 1,53
Hmgn1P18608 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24,6■■□□□ 1,53
Hmgn1P18608 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Hmgn1P18608 Gm2415-204ENSMUST00000190235 2004 ntBASIC24,58■■□□□ 1,53
Hmgn1P18608 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24,58■■□□□ 1,53
Hmgn1P18608 Zfp131-207ENSMUST00000224946 1783 ntBASIC24,56■■□□□ 1,52
Hmgn1P18608 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24,55■■□□□ 1,52
Hmgn1P18608 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24,51■■□□□ 1,51
Hmgn1P18608 Gm25238-201ENSMUST00000174914 89 ntBASIC24,51■■□□□ 1,51
Hmgn1P18608 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24,5■■□□□ 1,51
Hmgn1P18608 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24,49■■□□□ 1,51
Hmgn1P18608 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24,48■■□□□ 1,51
Hmgn1P18608 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24,46■■□□□ 1,51
Hmgn1P18608 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24,46■■□□□ 1,51
Hmgn1P18608 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24,46■■□□□ 1,51
Hmgn1P18608 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24,45■■□□□ 1,5
Hmgn1P18608 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24,43■■□□□ 1,5
Hmgn1P18608 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24,43■■□□□ 1,5
Hmgn1P18608 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24,43■■□□□ 1,5
Hmgn1P18608 Gm6658-202ENSMUST00000209493 1885 ntBASIC24,41■■□□□ 1,5
Hmgn1P18608 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24,38■■□□□ 1,49
Hmgn1P18608 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24,34■■□□□ 1,49
Hmgn1P18608 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24,33■■□□□ 1,49
Hmgn1P18608 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24,3■■□□□ 1,48
Hmgn1P18608 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24,29■■□□□ 1,48
Hmgn1P18608 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24,28■■□□□ 1,48
Hmgn1P18608 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24,28■■□□□ 1,48
Hmgn1P18608 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24,27■■□□□ 1,48
Hmgn1P18608 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24,25■■□□□ 1,47
Hmgn1P18608 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24,24■■□□□ 1,47
Hmgn1P18608 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24,24■■□□□ 1,47
Hmgn1P18608 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24,23■■□□□ 1,47
Hmgn1P18608 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24,23■■□□□ 1,47
Hmgn1P18608 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24,22■■□□□ 1,47
Hmgn1P18608 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24,22■■□□□ 1,47
Hmgn1P18608 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24,22■■□□□ 1,47
Hmgn1P18608 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Hmgn1P18608 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24,21■■□□□ 1,47
Hmgn1P18608 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24,2■■□□□ 1,46
Hmgn1P18608 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24,19■■□□□ 1,46
Hmgn1P18608 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Hmgn1P18608 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24,17■■□□□ 1,46
Hmgn1P18608 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24,16■■□□□ 1,46
Hmgn1P18608 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24,14■■□□□ 1,45
Hmgn1P18608 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Hmgn1P18608 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24,1■■□□□ 1,45
Hmgn1P18608 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24,09■■□□□ 1,45
Hmgn1P18608 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24,05■■□□□ 1,44
Hmgn1P18608 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24,03■■□□□ 1,44
Hmgn1P18608 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24,03■■□□□ 1,44
Hmgn1P18608 Rab21-202ENSMUST00000218831 843 ntBASIC24,02■■□□□ 1,44
Hmgn1P18608 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24,01■■□□□ 1,43
Hmgn1P18608 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24,01■■□□□ 1,43
Hmgn1P18608 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24,01■■□□□ 1,43
Hmgn1P18608 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1,43
Hmgn1P18608 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24■■□□□ 1,43
Hmgn1P18608 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1,43
Hmgn1P18608 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23,99■■□□□ 1,43
Hmgn1P18608 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23,98■■□□□ 1,43
Hmgn1P18608 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23,98■■□□□ 1,43
Hmgn1P18608 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23,96■■□□□ 1,43
Hmgn1P18608 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23,96■■□□□ 1,43
Hmgn1P18608 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23,94■■□□□ 1,42
Hmgn1P18608 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23,93■■□□□ 1,42
Hmgn1P18608 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23,93■■□□□ 1,42
Hmgn1P18608 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23,92■■□□□ 1,42
Hmgn1P18608 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23,92■■□□□ 1,42
Hmgn1P18608 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23,9■■□□□ 1,42
Hmgn1P18608 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23,9■■□□□ 1,42
Hmgn1P18608 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23,89■■□□□ 1,42
Hmgn1P18608 Gm9905-201ENSMUST00000065740 1845 ntBASIC23,87■■□□□ 1,41
Retrieved 100 of 76,532 protein–RNA pairs in 11,2 ms