Protein–RNA interactions for Protein: P11378

Tnp2, Nuclear transition protein 2, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnp2P11378 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Tnp2P11378 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnp2P11378 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnp2P11378 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnp2P11378 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tnp2P11378 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.04■□□□□ 0.48
Tnp2P11378 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.04■□□□□ 0.48
Tnp2P11378 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnp2P11378 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.03■□□□□ 0.48
Tnp2P11378 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.02■□□□□ 0.48
Tnp2P11378 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnp2P11378 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18■□□□□ 0.47
Tnp2P11378 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnp2P11378 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Tnp2P11378 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tnp2P11378 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.93■□□□□ 0.46
Tnp2P11378 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.9■□□□□ 0.46
Tnp2P11378 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnp2P11378 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tnp2P11378 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnp2P11378 Gm10524-201ENSMUST00000181931 1893 ntBASIC17.87■□□□□ 0.45
Tnp2P11378 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.86■□□□□ 0.45
Tnp2P11378 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tnp2P11378 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnp2P11378 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tnp2P11378 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnp2P11378 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnp2P11378 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnp2P11378 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnp2P11378 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.77■□□□□ 0.44
Tnp2P11378 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnp2P11378 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Tnp2P11378 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnp2P11378 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnp2P11378 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnp2P11378 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnp2P11378 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.71■□□□□ 0.43
Tnp2P11378 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tnp2P11378 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tnp2P11378 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnp2P11378 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tnp2P11378 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tnp2P11378 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnp2P11378 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnp2P11378 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnp2P11378 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnp2P11378 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.6■□□□□ 0.41
Tnp2P11378 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Tnp2P11378 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnp2P11378 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.59■□□□□ 0.41
Tnp2P11378 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.58■□□□□ 0.4
Tnp2P11378 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.57■□□□□ 0.4
Tnp2P11378 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnp2P11378 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tnp2P11378 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.54■□□□□ 0.4
Tnp2P11378 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.54■□□□□ 0.4
Tnp2P11378 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnp2P11378 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnp2P11378 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnp2P11378 Gm16148-201ENSMUST00000119653 893 ntBASIC17.5■□□□□ 0.39
Tnp2P11378 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnp2P11378 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.5■□□□□ 0.39
Tnp2P11378 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tnp2P11378 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnp2P11378 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnp2P11378 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tnp2P11378 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Tnp2P11378 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnp2P11378 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.4■□□□□ 0.38
Tnp2P11378 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tnp2P11378 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.39■□□□□ 0.37
Tnp2P11378 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnp2P11378 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tnp2P11378 Gm45855-201ENSMUST00000212546 880 ntBASIC17.37■□□□□ 0.37
Tnp2P11378 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnp2P11378 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Tnp2P11378 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tnp2P11378 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnp2P11378 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.33■□□□□ 0.36
Tnp2P11378 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnp2P11378 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tnp2P11378 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnp2P11378 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnp2P11378 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.31■□□□□ 0.36
Tnp2P11378 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnp2P11378 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnp2P11378 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnp2P11378 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnp2P11378 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Tnp2P11378 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnp2P11378 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnp2P11378 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Tnp2P11378 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Tnp2P11378 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnp2P11378 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnp2P11378 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnp2P11378 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnp2P11378 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnp2P11378 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Tnp2P11378 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms