Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smim1P0C8K7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smim1P0C8K7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smim1P0C8K7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smim1P0C8K7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smim1P0C8K7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smim1P0C8K7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim1P0C8K7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smim1P0C8K7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim1P0C8K7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Smim1P0C8K7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim1P0C8K7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smim1P0C8K7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smim1P0C8K7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim1P0C8K7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim1P0C8K7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smim1P0C8K7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smim1P0C8K7 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.77■□□□□ 0.6
Smim1P0C8K7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smim1P0C8K7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim1P0C8K7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.75■□□□□ 0.59
Smim1P0C8K7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim1P0C8K7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim1P0C8K7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim1P0C8K7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim1P0C8K7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smim1P0C8K7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim1P0C8K7 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.66■□□□□ 0.58
Smim1P0C8K7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim1P0C8K7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smim1P0C8K7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim1P0C8K7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smim1P0C8K7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim1P0C8K7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim1P0C8K7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smim1P0C8K7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smim1P0C8K7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Smim1P0C8K7 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.57■□□□□ 0.56
Smim1P0C8K7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim1P0C8K7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smim1P0C8K7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim1P0C8K7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim1P0C8K7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.54■□□□□ 0.56
Smim1P0C8K7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smim1P0C8K7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim1P0C8K7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Smim1P0C8K7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim1P0C8K7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim1P0C8K7 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.49■□□□□ 0.55
Smim1P0C8K7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smim1P0C8K7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim1P0C8K7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim1P0C8K7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim1P0C8K7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smim1P0C8K7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smim1P0C8K7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim1P0C8K7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
Smim1P0C8K7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim1P0C8K7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim1P0C8K7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim1P0C8K7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim1P0C8K7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smim1P0C8K7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smim1P0C8K7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Smim1P0C8K7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim1P0C8K7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim1P0C8K7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim1P0C8K7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
Smim1P0C8K7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Smim1P0C8K7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smim1P0C8K7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smim1P0C8K7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Smim1P0C8K7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.31■□□□□ 0.52
Smim1P0C8K7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Smim1P0C8K7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smim1P0C8K7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smim1P0C8K7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smim1P0C8K7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim1P0C8K7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim1P0C8K7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim1P0C8K7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smim1P0C8K7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim1P0C8K7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim1P0C8K7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim1P0C8K7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim1P0C8K7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim1P0C8K7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim1P0C8K7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim1P0C8K7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smim1P0C8K7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim1P0C8K7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim1P0C8K7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smim1P0C8K7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.2■□□□□ 0.5
Smim1P0C8K7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim1P0C8K7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smim1P0C8K7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim1P0C8K7 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.17■□□□□ 0.5
Smim1P0C8K7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim1P0C8K7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim1P0C8K7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms