Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PdgfrbP05622 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
PdgfrbP05622 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.04■■■□□ 2.08
PdgfrbP05622 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PdgfrbP05622 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PdgfrbP05622 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PdgfrbP05622 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.97■■■□□ 2.07
PdgfrbP05622 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
PdgfrbP05622 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
PdgfrbP05622 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
PdgfrbP05622 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PdgfrbP05622 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PdgfrbP05622 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
PdgfrbP05622 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PdgfrbP05622 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.79■■■□□ 2.04
PdgfrbP05622 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PdgfrbP05622 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.72■■■□□ 2.03
PdgfrbP05622 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
PdgfrbP05622 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PdgfrbP05622 Gm25262-201ENSMUST00000174934 133 ntBASIC27.7■■■□□ 2.02
PdgfrbP05622 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.68■■■□□ 2.02
PdgfrbP05622 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
PdgfrbP05622 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
PdgfrbP05622 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PdgfrbP05622 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PdgfrbP05622 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
PdgfrbP05622 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
PdgfrbP05622 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
PdgfrbP05622 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
PdgfrbP05622 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PdgfrbP05622 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PdgfrbP05622 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.55■■■□□ 2
PdgfrbP05622 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.55■■■□□ 2
PdgfrbP05622 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PdgfrbP05622 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
PdgfrbP05622 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.47■■□□□ 1.99
PdgfrbP05622 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PdgfrbP05622 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PdgfrbP05622 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PdgfrbP05622 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PdgfrbP05622 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PdgfrbP05622 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
PdgfrbP05622 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PdgfrbP05622 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PdgfrbP05622 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PdgfrbP05622 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PdgfrbP05622 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.23■■□□□ 1.95
PdgfrbP05622 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
PdgfrbP05622 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PdgfrbP05622 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PdgfrbP05622 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.15■■□□□ 1.94
PdgfrbP05622 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
PdgfrbP05622 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.14■■□□□ 1.94
PdgfrbP05622 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PdgfrbP05622 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.09■■□□□ 1.93
PdgfrbP05622 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PdgfrbP05622 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
PdgfrbP05622 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
PdgfrbP05622 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
PdgfrbP05622 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.05■■□□□ 1.92
PdgfrbP05622 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PdgfrbP05622 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PdgfrbP05622 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PdgfrbP05622 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PdgfrbP05622 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PdgfrbP05622 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PdgfrbP05622 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.94■■□□□ 1.9
PdgfrbP05622 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PdgfrbP05622 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
PdgfrbP05622 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PdgfrbP05622 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PdgfrbP05622 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PdgfrbP05622 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
PdgfrbP05622 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PdgfrbP05622 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
PdgfrbP05622 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.83■■□□□ 1.89
PdgfrbP05622 Gm27322-201ENSMUST00000184007 104 ntBASIC26.83■■□□□ 1.89
PdgfrbP05622 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.82■■□□□ 1.88
PdgfrbP05622 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PdgfrbP05622 Gm26115-201ENSMUST00000175605 87 ntBASIC26.8■■□□□ 1.88
PdgfrbP05622 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
PdgfrbP05622 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.78■■□□□ 1.88
PdgfrbP05622 Mipep-204ENSMUST00000225043 1548 ntBASIC26.77■■□□□ 1.88
PdgfrbP05622 Gm8109-201ENSMUST00000194076 746 ntBASIC26.77■■□□□ 1.88
PdgfrbP05622 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PdgfrbP05622 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PdgfrbP05622 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PdgfrbP05622 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
PdgfrbP05622 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
PdgfrbP05622 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PdgfrbP05622 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.69■■□□□ 1.86
PdgfrbP05622 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
PdgfrbP05622 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PdgfrbP05622 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.67■■□□□ 1.86
PdgfrbP05622 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.66■■□□□ 1.86
PdgfrbP05622 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
PdgfrbP05622 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PdgfrbP05622 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.62■■□□□ 1.85
PdgfrbP05622 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PdgfrbP05622 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.56■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms