Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.97■■□□□ 1.59
Abcd4O89016 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Abcd4O89016 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Abcd4O89016 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.94■■□□□ 1.58
Abcd4O89016 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.92■■□□□ 1.58
Abcd4O89016 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Abcd4O89016 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.87■■□□□ 1.57
Abcd4O89016 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.84■■□□□ 1.57
Abcd4O89016 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.81■■□□□ 1.56
Abcd4O89016 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Abcd4O89016 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Abcd4O89016 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Abcd4O89016 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.78■■□□□ 1.56
Abcd4O89016 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Abcd4O89016 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Abcd4O89016 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Abcd4O89016 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.66■■□□□ 1.54
Abcd4O89016 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Abcd4O89016 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Abcd4O89016 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Abcd4O89016 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Abcd4O89016 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Abcd4O89016 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.52■■□□□ 1.52
Abcd4O89016 Gm27322-201ENSMUST00000184007 104 ntBASIC24.52■■□□□ 1.52
Abcd4O89016 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Abcd4O89016 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Abcd4O89016 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Abcd4O89016 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Abcd4O89016 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Abcd4O89016 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
Abcd4O89016 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Abcd4O89016 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.31■■□□□ 1.48
Abcd4O89016 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Abcd4O89016 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Abcd4O89016 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Abcd4O89016 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Abcd4O89016 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Abcd4O89016 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Abcd4O89016 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Abcd4O89016 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.24■■□□□ 1.47
Abcd4O89016 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Abcd4O89016 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.18■■□□□ 1.46
Abcd4O89016 Gm24804-201ENSMUST00000174982 85 ntBASIC24.16■■□□□ 1.46
Abcd4O89016 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.15■■□□□ 1.46
Abcd4O89016 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Abcd4O89016 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Abcd4O89016 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Abcd4O89016 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Abcd4O89016 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
Abcd4O89016 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Abcd4O89016 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Abcd4O89016 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Abcd4O89016 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Abcd4O89016 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.04■■□□□ 1.44
Abcd4O89016 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.04■■□□□ 1.44
Abcd4O89016 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Abcd4O89016 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Abcd4O89016 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.95■■□□□ 1.42
Abcd4O89016 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Abcd4O89016 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Abcd4O89016 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Abcd4O89016 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Abcd4O89016 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Abcd4O89016 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Abcd4O89016 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Abcd4O89016 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Abcd4O89016 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Abcd4O89016 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Abcd4O89016 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Abcd4O89016 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Abcd4O89016 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Abcd4O89016 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Abcd4O89016 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Abcd4O89016 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Abcd4O89016 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Abcd4O89016 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.78■■□□□ 1.4
Abcd4O89016 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Abcd4O89016 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Abcd4O89016 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Abcd4O89016 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.73■■□□□ 1.39
Abcd4O89016 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Abcd4O89016 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Abcd4O89016 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Abcd4O89016 Zfp131-205ENSMUST00000223812 663 ntBASIC23.63■■□□□ 1.37
Abcd4O89016 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Abcd4O89016 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Abcd4O89016 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.6■■□□□ 1.37
Abcd4O89016 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Abcd4O89016 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Abcd4O89016 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Abcd4O89016 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Abcd4O89016 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.58■■□□□ 1.37
Abcd4O89016 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Abcd4O89016 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.58■■□□□ 1.36
Abcd4O89016 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.57■■□□□ 1.36
Abcd4O89016 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Abcd4O89016 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Abcd4O89016 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Abcd4O89016 Gm16148-201ENSMUST00000119653 893 ntBASIC23.51■■□□□ 1.35
Abcd4O89016 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms