Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Hcn1O88704 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Hcn1O88704 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Hcn1O88704 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Hcn1O88704 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Hcn1O88704 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Hcn1O88704 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.93■■□□□ 1.74
Hcn1O88704 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hcn1O88704 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hcn1O88704 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.92■■□□□ 1.74
Hcn1O88704 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Hcn1O88704 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Hcn1O88704 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Hcn1O88704 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Hcn1O88704 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Hcn1O88704 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Hcn1O88704 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.74■■□□□ 1.71
Hcn1O88704 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Hcn1O88704 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Hcn1O88704 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Hcn1O88704 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Hcn1O88704 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Hcn1O88704 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Hcn1O88704 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Hcn1O88704 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Hcn1O88704 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.68■■□□□ 1.7
Hcn1O88704 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.67■■□□□ 1.7
Hcn1O88704 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Hcn1O88704 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Hcn1O88704 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.63■■□□□ 1.69
Hcn1O88704 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.62■■□□□ 1.69
Hcn1O88704 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hcn1O88704 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Hcn1O88704 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.59■■□□□ 1.69
Hcn1O88704 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Hcn1O88704 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Hcn1O88704 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.53■■□□□ 1.68
Hcn1O88704 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Hcn1O88704 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.5■■□□□ 1.67
Hcn1O88704 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hcn1O88704 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hcn1O88704 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hcn1O88704 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hcn1O88704 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Hcn1O88704 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.43■■□□□ 1.66
Hcn1O88704 Gm26115-201ENSMUST00000175605 87 ntBASIC25.42■■□□□ 1.66
Hcn1O88704 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hcn1O88704 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Hcn1O88704 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Hcn1O88704 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hcn1O88704 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Hcn1O88704 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Hcn1O88704 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Hcn1O88704 Gm8109-201ENSMUST00000194076 746 ntBASIC25.32■■□□□ 1.64
Hcn1O88704 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Hcn1O88704 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.28■■□□□ 1.64
Hcn1O88704 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hcn1O88704 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hcn1O88704 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.26■■□□□ 1.63
Hcn1O88704 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
Hcn1O88704 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Hcn1O88704 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Hcn1O88704 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Hcn1O88704 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Hcn1O88704 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Hcn1O88704 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Hcn1O88704 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Hcn1O88704 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Hcn1O88704 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Hcn1O88704 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Hcn1O88704 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Hcn1O88704 Gm27322-201ENSMUST00000184007 104 ntBASIC25.09■■□□□ 1.61
Hcn1O88704 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Hcn1O88704 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Hcn1O88704 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.05■■□□□ 1.6
Hcn1O88704 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.04■■□□□ 1.6
Hcn1O88704 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
Hcn1O88704 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.98■■□□□ 1.59
Hcn1O88704 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Hcn1O88704 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.96■■□□□ 1.59
Hcn1O88704 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.95■■□□□ 1.59
Hcn1O88704 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Hcn1O88704 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Hcn1O88704 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Hcn1O88704 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.88■■□□□ 1.57
Hcn1O88704 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Hcn1O88704 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Hcn1O88704 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Hcn1O88704 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Hcn1O88704 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
Hcn1O88704 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Hcn1O88704 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.79■■□□□ 1.56
Hcn1O88704 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Hcn1O88704 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Hcn1O88704 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.77■■□□□ 1.56
Hcn1O88704 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hcn1O88704 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Hcn1O88704 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Hcn1O88704 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Hcn1O88704 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms