Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Hcn1O88704 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Hcn1O88704 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Hcn1O88704 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Hcn1O88704 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Hcn1O88704 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Hcn1O88704 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.93■■□□□ 1.74
Hcn1O88704 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hcn1O88704 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hcn1O88704 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.92■■□□□ 1.74
Hcn1O88704 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Hcn1O88704 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Hcn1O88704 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Hcn1O88704 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Hcn1O88704 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Hcn1O88704 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Hcn1O88704 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.74■■□□□ 1.71
Hcn1O88704 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Hcn1O88704 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Hcn1O88704 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Hcn1O88704 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Hcn1O88704 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Hcn1O88704 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Hcn1O88704 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Hcn1O88704 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Hcn1O88704 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.68■■□□□ 1.7
Hcn1O88704 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.67■■□□□ 1.7
Hcn1O88704 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Hcn1O88704 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Hcn1O88704 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.63■■□□□ 1.69
Hcn1O88704 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.62■■□□□ 1.69
Hcn1O88704 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hcn1O88704 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Hcn1O88704 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.59■■□□□ 1.69
Hcn1O88704 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Hcn1O88704 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Hcn1O88704 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.53■■□□□ 1.68
Hcn1O88704 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Hcn1O88704 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.5■■□□□ 1.67
Hcn1O88704 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hcn1O88704 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hcn1O88704 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hcn1O88704 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hcn1O88704 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Hcn1O88704 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.43■■□□□ 1.66
Hcn1O88704 Gm26115-201ENSMUST00000175605 87 ntBASIC25.42■■□□□ 1.66
Hcn1O88704 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hcn1O88704 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Hcn1O88704 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Hcn1O88704 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hcn1O88704 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Hcn1O88704 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Hcn1O88704 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Hcn1O88704 Gm8109-201ENSMUST00000194076 746 ntBASIC25.32■■□□□ 1.64
Hcn1O88704 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Hcn1O88704 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.28■■□□□ 1.64
Hcn1O88704 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hcn1O88704 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hcn1O88704 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.26■■□□□ 1.63
Hcn1O88704 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
Hcn1O88704 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Hcn1O88704 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Hcn1O88704 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Hcn1O88704 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Hcn1O88704 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Hcn1O88704 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Hcn1O88704 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Hcn1O88704 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Hcn1O88704 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Hcn1O88704 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Hcn1O88704 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Hcn1O88704 Gm27322-201ENSMUST00000184007 104 ntBASIC25.09■■□□□ 1.61
Hcn1O88704 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Hcn1O88704 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Hcn1O88704 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.05■■□□□ 1.6
Hcn1O88704 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.04■■□□□ 1.6
Hcn1O88704 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
Hcn1O88704 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.98■■□□□ 1.59
Hcn1O88704 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Hcn1O88704 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.96■■□□□ 1.59
Hcn1O88704 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.95■■□□□ 1.59
Hcn1O88704 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Hcn1O88704 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Hcn1O88704 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Hcn1O88704 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.88■■□□□ 1.57
Hcn1O88704 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Hcn1O88704 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Hcn1O88704 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Hcn1O88704 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Hcn1O88704 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
Hcn1O88704 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Hcn1O88704 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.79■■□□□ 1.56
Hcn1O88704 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Hcn1O88704 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Hcn1O88704 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.77■■□□□ 1.56
Hcn1O88704 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hcn1O88704 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Hcn1O88704 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Hcn1O88704 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Hcn1O88704 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms