Protein–RNA interactions for Protein: O70343

Ppargc1a, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppargc1aO70343 Gm25262-201ENSMUST00000174934 133 ntBASIC28.96■■■□□ 2.23
Ppargc1aO70343 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ppargc1aO70343 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Ppargc1aO70343 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ppargc1aO70343 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ppargc1aO70343 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
Ppargc1aO70343 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Ppargc1aO70343 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Ppargc1aO70343 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.78■■■□□ 2.2
Ppargc1aO70343 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.77■■■□□ 2.2
Ppargc1aO70343 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.2
Ppargc1aO70343 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ppargc1aO70343 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.66■■■□□ 2.18
Ppargc1aO70343 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ppargc1aO70343 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ppargc1aO70343 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Ppargc1aO70343 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ppargc1aO70343 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ppargc1aO70343 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ppargc1aO70343 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.5■■■□□ 2.15
Ppargc1aO70343 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ppargc1aO70343 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ppargc1aO70343 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ppargc1aO70343 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ppargc1aO70343 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.47■■■□□ 2.15
Ppargc1aO70343 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.43■■■□□ 2.14
Ppargc1aO70343 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Ppargc1aO70343 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ppargc1aO70343 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
Ppargc1aO70343 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Ppargc1aO70343 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.32■■■□□ 2.12
Ppargc1aO70343 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Ppargc1aO70343 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ppargc1aO70343 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Ppargc1aO70343 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ppargc1aO70343 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.25■■■□□ 2.11
Ppargc1aO70343 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ppargc1aO70343 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ppargc1aO70343 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.22■■■□□ 2.11
Ppargc1aO70343 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ppargc1aO70343 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ppargc1aO70343 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ppargc1aO70343 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ppargc1aO70343 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Ppargc1aO70343 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.14■■■□□ 2.1
Ppargc1aO70343 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ppargc1aO70343 Gm26115-201ENSMUST00000175605 87 ntBASIC28.11■■■□□ 2.09
Ppargc1aO70343 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Ppargc1aO70343 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ppargc1aO70343 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Ppargc1aO70343 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ppargc1aO70343 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ppargc1aO70343 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ppargc1aO70343 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.96■■■□□ 2.07
Ppargc1aO70343 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ppargc1aO70343 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.95■■■□□ 2.07
Ppargc1aO70343 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Ppargc1aO70343 Gm8109-201ENSMUST00000194076 746 ntBASIC27.95■■■□□ 2.06
Ppargc1aO70343 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Ppargc1aO70343 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Ppargc1aO70343 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ppargc1aO70343 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ppargc1aO70343 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Ppargc1aO70343 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ppargc1aO70343 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.85■■■□□ 2.05
Ppargc1aO70343 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ppargc1aO70343 Gm27322-201ENSMUST00000184007 104 ntBASIC27.81■■■□□ 2.04
Ppargc1aO70343 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
Ppargc1aO70343 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Ppargc1aO70343 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Ppargc1aO70343 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Ppargc1aO70343 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.75■■■□□ 2.03
Ppargc1aO70343 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.74■■■□□ 2.03
Ppargc1aO70343 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Ppargc1aO70343 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Ppargc1aO70343 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Ppargc1aO70343 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ppargc1aO70343 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
Ppargc1aO70343 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.67■■■□□ 2.02
Ppargc1aO70343 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ppargc1aO70343 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ppargc1aO70343 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
Ppargc1aO70343 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.56■■■□□ 2
Ppargc1aO70343 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.56■■■□□ 2
Ppargc1aO70343 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
Ppargc1aO70343 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ppargc1aO70343 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ppargc1aO70343 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ppargc1aO70343 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ppargc1aO70343 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.47■■□□□ 1.99
Ppargc1aO70343 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.46■■□□□ 1.99
Ppargc1aO70343 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.99
Ppargc1aO70343 Mipep-204ENSMUST00000225043 1548 ntBASIC27.45■■□□□ 1.98
Ppargc1aO70343 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Ppargc1aO70343 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Ppargc1aO70343 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ppargc1aO70343 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ppargc1aO70343 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ppargc1aO70343 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ppargc1aO70343 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms