Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Efnb3O35393 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.51■■□□□ 1.03
Efnb3O35393 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Efnb3O35393 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Efnb3O35393 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Efnb3O35393 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Efnb3O35393 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Efnb3O35393 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Efnb3O35393 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.4■■□□□ 1.02
Efnb3O35393 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Efnb3O35393 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.39■■□□□ 1.02
Efnb3O35393 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Efnb3O35393 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Efnb3O35393 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Efnb3O35393 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.33■■□□□ 1.01
Efnb3O35393 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Efnb3O35393 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Efnb3O35393 Gm25238-201ENSMUST00000174914 89 ntBASIC21.28■■□□□ 1
Efnb3O35393 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Efnb3O35393 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Efnb3O35393 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.26■□□□□ 0.99
Efnb3O35393 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Efnb3O35393 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Efnb3O35393 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.23■□□□□ 0.99
Efnb3O35393 Gm27325-201ENSMUST00000175467 74 ntBASIC21.23■□□□□ 0.99
Efnb3O35393 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Efnb3O35393 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Efnb3O35393 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Efnb3O35393 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Efnb3O35393 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Efnb3O35393 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Efnb3O35393 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Efnb3O35393 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Efnb3O35393 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.06■□□□□ 0.96
Efnb3O35393 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.04■□□□□ 0.96
Efnb3O35393 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Efnb3O35393 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Efnb3O35393 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Efnb3O35393 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Efnb3O35393 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Efnb3O35393 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.99■□□□□ 0.95
Efnb3O35393 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.95■□□□□ 0.95
Efnb3O35393 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Efnb3O35393 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Efnb3O35393 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Efnb3O35393 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Efnb3O35393 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Efnb3O35393 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Efnb3O35393 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Efnb3O35393 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Efnb3O35393 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.91■□□□□ 0.94
Efnb3O35393 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Efnb3O35393 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.89■□□□□ 0.93
Efnb3O35393 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Efnb3O35393 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Efnb3O35393 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Efnb3O35393 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Efnb3O35393 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Efnb3O35393 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Efnb3O35393 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Efnb3O35393 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Efnb3O35393 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.8■□□□□ 0.92
Efnb3O35393 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Efnb3O35393 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Efnb3O35393 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Efnb3O35393 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Efnb3O35393 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Efnb3O35393 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.74■□□□□ 0.91
Efnb3O35393 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.73■□□□□ 0.91
Efnb3O35393 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Efnb3O35393 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Efnb3O35393 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Efnb3O35393 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Efnb3O35393 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.67■□□□□ 0.9
Efnb3O35393 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Efnb3O35393 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Efnb3O35393 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Efnb3O35393 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.65■□□□□ 0.9
Efnb3O35393 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Efnb3O35393 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Efnb3O35393 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.63■□□□□ 0.89
Efnb3O35393 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Efnb3O35393 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Efnb3O35393 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Efnb3O35393 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Efnb3O35393 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Efnb3O35393 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Efnb3O35393 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Efnb3O35393 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Efnb3O35393 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Efnb3O35393 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Efnb3O35393 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Efnb3O35393 Rab21-202ENSMUST00000218831 843 ntBASIC20.52■□□□□ 0.88
Efnb3O35393 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Efnb3O35393 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Efnb3O35393 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Efnb3O35393 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.48■□□□□ 0.87
Efnb3O35393 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.48■□□□□ 0.87
Efnb3O35393 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Efnb3O35393 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms