Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Tnfsf11O35235 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfsf11O35235 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Tnfsf11O35235 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Tnfsf11O35235 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tnfsf11O35235 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tnfsf11O35235 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Tnfsf11O35235 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfsf11O35235 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfsf11O35235 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfsf11O35235 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfsf11O35235 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfsf11O35235 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfsf11O35235 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21■□□□□ 0.95
Tnfsf11O35235 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfsf11O35235 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.95■□□□□ 0.94
Tnfsf11O35235 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Tnfsf11O35235 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfsf11O35235 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfsf11O35235 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfsf11O35235 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tnfsf11O35235 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfsf11O35235 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.85■□□□□ 0.93
Tnfsf11O35235 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfsf11O35235 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfsf11O35235 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfsf11O35235 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf11O35235 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.79■□□□□ 0.92
Tnfsf11O35235 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Tnfsf11O35235 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf11O35235 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf11O35235 Zxda-201ENSMUST00000117281 2621 ntBASIC20.73■□□□□ 0.91
Tnfsf11O35235 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.72■□□□□ 0.91
Tnfsf11O35235 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsf11O35235 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf11O35235 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf11O35235 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsf11O35235 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsf11O35235 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsf11O35235 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Tnfsf11O35235 Gm27325-201ENSMUST00000175467 74 ntBASIC20.64■□□□□ 0.89
Tnfsf11O35235 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfsf11O35235 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
Tnfsf11O35235 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsf11O35235 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.54■□□□□ 0.88
Tnfsf11O35235 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfsf11O35235 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfsf11O35235 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfsf11O35235 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfsf11O35235 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfsf11O35235 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfsf11O35235 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.51■□□□□ 0.87
Tnfsf11O35235 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfsf11O35235 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfsf11O35235 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfsf11O35235 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfsf11O35235 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfsf11O35235 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.48■□□□□ 0.87
Tnfsf11O35235 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfsf11O35235 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfsf11O35235 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfsf11O35235 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfsf11O35235 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfsf11O35235 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfsf11O35235 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfsf11O35235 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsf11O35235 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsf11O35235 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.41■□□□□ 0.86
Tnfsf11O35235 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.41■□□□□ 0.86
Tnfsf11O35235 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsf11O35235 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tnfsf11O35235 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.39■□□□□ 0.85
Tnfsf11O35235 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfsf11O35235 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfsf11O35235 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.38■□□□□ 0.85
Tnfsf11O35235 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfsf11O35235 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfsf11O35235 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfsf11O35235 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfsf11O35235 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfsf11O35235 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfsf11O35235 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfsf11O35235 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfsf11O35235 Gm25238-201ENSMUST00000174914 89 ntBASIC20.3■□□□□ 0.84
Tnfsf11O35235 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfsf11O35235 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfsf11O35235 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfsf11O35235 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfsf11O35235 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.27■□□□□ 0.84
Tnfsf11O35235 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfsf11O35235 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf11O35235 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf11O35235 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfsf11O35235 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Tnfsf11O35235 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.23■□□□□ 0.83
Tnfsf11O35235 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfsf11O35235 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfsf11O35235 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tnfsf11O35235 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfsf11O35235 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms