Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC33.15■■■□□ 2.9
Hdac1O09106 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.14■■■□□ 2.9
Hdac1O09106 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC33.07■■■□□ 2.89
Hdac1O09106 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.07■■■□□ 2.88
Hdac1O09106 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Hdac1O09106 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Hdac1O09106 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Hdac1O09106 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
Hdac1O09106 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Hdac1O09106 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Hdac1O09106 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Hdac1O09106 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Hdac1O09106 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.82■■■□□ 2.84
Hdac1O09106 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Hdac1O09106 Gm25238-201ENSMUST00000174914 89 ntBASIC32.77■■■□□ 2.84
Hdac1O09106 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Hdac1O09106 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.76■■■□□ 2.83
Hdac1O09106 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.75■■■□□ 2.83
Hdac1O09106 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Hdac1O09106 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC32.71■■■□□ 2.83
Hdac1O09106 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Hdac1O09106 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.68■■■□□ 2.82
Hdac1O09106 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Hdac1O09106 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
Hdac1O09106 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Hdac1O09106 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Hdac1O09106 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.52■■■□□ 2.8
Hdac1O09106 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Hdac1O09106 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.45■■■□□ 2.79
Hdac1O09106 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
Hdac1O09106 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.43■■■□□ 2.78
Hdac1O09106 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.42■■■□□ 2.78
Hdac1O09106 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC32.41■■■□□ 2.78
Hdac1O09106 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Hdac1O09106 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Hdac1O09106 Gm2415-204ENSMUST00000190235 2004 ntBASIC32.3■■■□□ 2.76
Hdac1O09106 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Hdac1O09106 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
Hdac1O09106 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Hdac1O09106 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Hdac1O09106 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Hdac1O09106 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC32.21■■■□□ 2.75
Hdac1O09106 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Hdac1O09106 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.2■■■□□ 2.75
Hdac1O09106 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Hdac1O09106 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
Hdac1O09106 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Hdac1O09106 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Hdac1O09106 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Hdac1O09106 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.12■■■□□ 2.73
Hdac1O09106 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Hdac1O09106 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
Hdac1O09106 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Hdac1O09106 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Hdac1O09106 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.03■■■□□ 2.72
Hdac1O09106 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.03■■■□□ 2.72
Hdac1O09106 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Hdac1O09106 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.99■■■□□ 2.71
Hdac1O09106 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Hdac1O09106 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Hdac1O09106 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.95■■■□□ 2.71
Hdac1O09106 Rab21-202ENSMUST00000218831 843 ntBASIC31.91■■■□□ 2.7
Hdac1O09106 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Hdac1O09106 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.89■■■□□ 2.7
Hdac1O09106 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Hdac1O09106 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
Hdac1O09106 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Hdac1O09106 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.84■■■□□ 2.69
Hdac1O09106 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Hdac1O09106 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Hdac1O09106 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Hdac1O09106 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Hdac1O09106 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Hdac1O09106 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Hdac1O09106 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.74■■■□□ 2.67
Hdac1O09106 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Hdac1O09106 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Hdac1O09106 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Hdac1O09106 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.66
Hdac1O09106 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.69■■■□□ 2.66
Hdac1O09106 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
Hdac1O09106 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Hdac1O09106 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.65■■■□□ 2.66
Hdac1O09106 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Hdac1O09106 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.64■■■□□ 2.66
Hdac1O09106 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Hdac1O09106 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Hdac1O09106 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Hdac1O09106 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Hdac1O09106 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Hdac1O09106 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Hdac1O09106 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.53■■■□□ 2.64
Hdac1O09106 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Hdac1O09106 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Hdac1O09106 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Hdac1O09106 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Hdac1O09106 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Hdac1O09106 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Hdac1O09106 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Hdac1O09106 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms