Protein–RNA interactions for Protein: F7BCN9

Gm28038, Predicted gene, 28038 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28038F7BCN9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28038F7BCN9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28038F7BCN9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28038F7BCN9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28038F7BCN9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28038F7BCN9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm28038F7BCN9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Gm28038F7BCN9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.01■□□□□ 0.79
Gm28038F7BCN9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.99■□□□□ 0.79
Gm28038F7BCN9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28038F7BCN9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Gm28038F7BCN9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28038F7BCN9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm28038F7BCN9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.91■□□□□ 0.78
Gm28038F7BCN9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm28038F7BCN9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28038F7BCN9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.88■□□□□ 0.77
Gm28038F7BCN9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28038F7BCN9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Gm28038F7BCN9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm28038F7BCN9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Gm28038F7BCN9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.8■□□□□ 0.76
Gm28038F7BCN9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm28038F7BCN9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm28038F7BCN9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm28038F7BCN9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28038F7BCN9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm28038F7BCN9 Gm27325-201ENSMUST00000175467 74 ntBASIC19.72■□□□□ 0.75
Gm28038F7BCN9 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.68■□□□□ 0.74
Gm28038F7BCN9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.67■□□□□ 0.74
Gm28038F7BCN9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28038F7BCN9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.58■□□□□ 0.72
Gm28038F7BCN9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm28038F7BCN9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Gm28038F7BCN9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm28038F7BCN9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28038F7BCN9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28038F7BCN9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28038F7BCN9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28038F7BCN9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28038F7BCN9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28038F7BCN9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28038F7BCN9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28038F7BCN9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Gm28038F7BCN9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.52■□□□□ 0.72
Gm28038F7BCN9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm28038F7BCN9 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.51■□□□□ 0.71
Gm28038F7BCN9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28038F7BCN9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28038F7BCN9 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.47■□□□□ 0.71
Gm28038F7BCN9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.47■□□□□ 0.71
Gm28038F7BCN9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28038F7BCN9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28038F7BCN9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28038F7BCN9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28038F7BCN9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28038F7BCN9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28038F7BCN9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28038F7BCN9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28038F7BCN9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28038F7BCN9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28038F7BCN9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28038F7BCN9 Gm25238-201ENSMUST00000174914 89 ntBASIC19.34■□□□□ 0.69
Gm28038F7BCN9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28038F7BCN9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm28038F7BCN9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm28038F7BCN9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.32■□□□□ 0.68
Gm28038F7BCN9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28038F7BCN9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28038F7BCN9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28038F7BCN9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.28■□□□□ 0.68
Gm28038F7BCN9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm28038F7BCN9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm28038F7BCN9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28038F7BCN9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28038F7BCN9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28038F7BCN9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.24■□□□□ 0.67
Gm28038F7BCN9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.23■□□□□ 0.67
Gm28038F7BCN9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28038F7BCN9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gm28038F7BCN9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28038F7BCN9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28038F7BCN9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28038F7BCN9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28038F7BCN9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28038F7BCN9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28038F7BCN9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28038F7BCN9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28038F7BCN9 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.18■□□□□ 0.66
Gm28038F7BCN9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28038F7BCN9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28038F7BCN9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Gm28038F7BCN9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28038F7BCN9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28038F7BCN9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28038F7BCN9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Gm28038F7BCN9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Gm28038F7BCN9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.09■□□□□ 0.65
Gm28038F7BCN9 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.08■□□□□ 0.65
Gm28038F7BCN9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms