Protein–RNA interactions for Protein: E9Q876

Abca12, ATP-binding cassette, sub-family A (ABC1), member 12, mousemouse

Predictions only

Length 2,595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca12E9Q876 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.73■■□□□ 1.55
Abca12E9Q876 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Abca12E9Q876 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.69■■□□□ 1.54
Abca12E9Q876 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Abca12E9Q876 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Abca12E9Q876 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Abca12E9Q876 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.53
Abca12E9Q876 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.63■■□□□ 1.53
Abca12E9Q876 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.61■■□□□ 1.53
Abca12E9Q876 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.61■■□□□ 1.53
Abca12E9Q876 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Abca12E9Q876 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Abca12E9Q876 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.44■■□□□ 1.5
Abca12E9Q876 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Abca12E9Q876 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.41■■□□□ 1.5
Abca12E9Q876 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Abca12E9Q876 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Abca12E9Q876 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Abca12E9Q876 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Abca12E9Q876 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Abca12E9Q876 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Abca12E9Q876 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Abca12E9Q876 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Abca12E9Q876 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.28■■□□□ 1.48
Abca12E9Q876 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Abca12E9Q876 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Abca12E9Q876 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.25■■□□□ 1.47
Abca12E9Q876 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.24■■□□□ 1.47
Abca12E9Q876 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Abca12E9Q876 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.21■■□□□ 1.47
Abca12E9Q876 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.18■■□□□ 1.46
Abca12E9Q876 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Abca12E9Q876 Psd-208ENSMUST00000224556 2034 ntBASIC24.17■■□□□ 1.46
Abca12E9Q876 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Abca12E9Q876 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.14■■□□□ 1.46
Abca12E9Q876 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Abca12E9Q876 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Abca12E9Q876 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.12■■□□□ 1.45
Abca12E9Q876 Gm16148-201ENSMUST00000119653 893 ntBASIC24.07■■□□□ 1.44
Abca12E9Q876 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Abca12E9Q876 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Abca12E9Q876 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Abca12E9Q876 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.03■■□□□ 1.44
Abca12E9Q876 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Abca12E9Q876 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Abca12E9Q876 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Abca12E9Q876 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Abca12E9Q876 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.98■■□□□ 1.43
Abca12E9Q876 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Abca12E9Q876 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Abca12E9Q876 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Abca12E9Q876 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Abca12E9Q876 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Abca12E9Q876 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Abca12E9Q876 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Abca12E9Q876 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Abca12E9Q876 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Abca12E9Q876 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Abca12E9Q876 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Abca12E9Q876 Gm45855-201ENSMUST00000212546 880 ntBASIC23.84■■□□□ 1.41
Abca12E9Q876 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Abca12E9Q876 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Abca12E9Q876 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Abca12E9Q876 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Abca12E9Q876 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
Abca12E9Q876 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Abca12E9Q876 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Abca12E9Q876 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Abca12E9Q876 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Abca12E9Q876 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Abca12E9Q876 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Abca12E9Q876 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.69■■□□□ 1.38
Abca12E9Q876 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.68■■□□□ 1.38
Abca12E9Q876 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Abca12E9Q876 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Abca12E9Q876 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Abca12E9Q876 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Abca12E9Q876 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.64■■□□□ 1.38
Abca12E9Q876 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.64■■□□□ 1.37
Abca12E9Q876 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Abca12E9Q876 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Abca12E9Q876 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Abca12E9Q876 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Abca12E9Q876 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Abca12E9Q876 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Abca12E9Q876 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.55■■□□□ 1.36
Abca12E9Q876 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
Abca12E9Q876 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.55■■□□□ 1.36
Abca12E9Q876 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Abca12E9Q876 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Abca12E9Q876 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Abca12E9Q876 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Abca12E9Q876 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.52■■□□□ 1.36
Abca12E9Q876 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Abca12E9Q876 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Abca12E9Q876 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.51■■□□□ 1.35
Abca12E9Q876 Peli2-204ENSMUST00000226513 1320 ntBASIC23.51■■□□□ 1.35
Abca12E9Q876 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Abca12E9Q876 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Abca12E9Q876 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms