Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.9■■■□□ 2.7
Cntnap3E9PY62 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Cntnap3E9PY62 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
Cntnap3E9PY62 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.75■■■□□ 2.67
Cntnap3E9PY62 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.74■■■□□ 2.67
Cntnap3E9PY62 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.73■■■□□ 2.67
Cntnap3E9PY62 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Cntnap3E9PY62 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Cntnap3E9PY62 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Cntnap3E9PY62 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Cntnap3E9PY62 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Cntnap3E9PY62 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.55■■■□□ 2.64
Cntnap3E9PY62 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Cntnap3E9PY62 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Cntnap3E9PY62 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.47■■■□□ 2.63
Cntnap3E9PY62 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cntnap3E9PY62 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.41■■■□□ 2.62
Cntnap3E9PY62 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Cntnap3E9PY62 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.36■■■□□ 2.61
Cntnap3E9PY62 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
Cntnap3E9PY62 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Cntnap3E9PY62 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cntnap3E9PY62 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.28■■■□□ 2.6
Cntnap3E9PY62 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Cntnap3E9PY62 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Cntnap3E9PY62 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.26■■■□□ 2.59
Cntnap3E9PY62 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.26■■■□□ 2.59
Cntnap3E9PY62 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cntnap3E9PY62 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.24■■■□□ 2.59
Cntnap3E9PY62 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Cntnap3E9PY62 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.17■■■□□ 2.58
Cntnap3E9PY62 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Cntnap3E9PY62 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.11■■■□□ 2.57
Cntnap3E9PY62 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Cntnap3E9PY62 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Cntnap3E9PY62 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cntnap3E9PY62 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
Cntnap3E9PY62 Gm16148-201ENSMUST00000119653 893 ntBASIC30.97■■■□□ 2.55
Cntnap3E9PY62 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cntnap3E9PY62 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.97■■■□□ 2.55
Cntnap3E9PY62 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Cntnap3E9PY62 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.94■■■□□ 2.54
Cntnap3E9PY62 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Cntnap3E9PY62 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Cntnap3E9PY62 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.85■■■□□ 2.53
Cntnap3E9PY62 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Cntnap3E9PY62 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
Cntnap3E9PY62 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.82■■■□□ 2.52
Cntnap3E9PY62 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.81■■■□□ 2.52
Cntnap3E9PY62 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Cntnap3E9PY62 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Cntnap3E9PY62 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
Cntnap3E9PY62 Gm45855-201ENSMUST00000212546 880 ntBASIC30.77■■■□□ 2.52
Cntnap3E9PY62 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Cntnap3E9PY62 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Cntnap3E9PY62 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cntnap3E9PY62 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Cntnap3E9PY62 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cntnap3E9PY62 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cntnap3E9PY62 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cntnap3E9PY62 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
Cntnap3E9PY62 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Cntnap3E9PY62 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Cntnap3E9PY62 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cntnap3E9PY62 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.67■■■□□ 2.5
Cntnap3E9PY62 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Cntnap3E9PY62 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cntnap3E9PY62 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cntnap3E9PY62 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cntnap3E9PY62 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cntnap3E9PY62 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Cntnap3E9PY62 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cntnap3E9PY62 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cntnap3E9PY62 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.55■■■□□ 2.48
Cntnap3E9PY62 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
Cntnap3E9PY62 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cntnap3E9PY62 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cntnap3E9PY62 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cntnap3E9PY62 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cntnap3E9PY62 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Cntnap3E9PY62 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.44■■■□□ 2.46
Cntnap3E9PY62 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
Cntnap3E9PY62 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Cntnap3E9PY62 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Cntnap3E9PY62 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Cntnap3E9PY62 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Cntnap3E9PY62 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Cntnap3E9PY62 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Cntnap3E9PY62 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Cntnap3E9PY62 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Cntnap3E9PY62 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Cntnap3E9PY62 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Cntnap3E9PY62 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Cntnap3E9PY62 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Cntnap3E9PY62 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Cntnap3E9PY62 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
Cntnap3E9PY62 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Cntnap3E9PY62 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Cntnap3E9PY62 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.26■■■□□ 2.43
Cntnap3E9PY62 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.26■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms