Protein–RNA interactions for Protein: D6RFQ2

Gm42957, Predicted gene 42957, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42957D6RFQ2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.07■■■□□ 2.08
Gm42957D6RFQ2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Gm42957D6RFQ2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.05■■■□□ 2.08
Gm42957D6RFQ2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.02■■■□□ 2.08
Gm42957D6RFQ2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Gm42957D6RFQ2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Gm42957D6RFQ2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Gm42957D6RFQ2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.96■■■□□ 2.07
Gm42957D6RFQ2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Gm42957D6RFQ2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.88■■■□□ 2.05
Gm42957D6RFQ2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Gm42957D6RFQ2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Gm42957D6RFQ2 Psd-208ENSMUST00000224556 2034 ntBASIC27.72■■■□□ 2.03
Gm42957D6RFQ2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.69■■■□□ 2.02
Gm42957D6RFQ2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Gm42957D6RFQ2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Gm42957D6RFQ2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Gm42957D6RFQ2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Gm42957D6RFQ2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Gm42957D6RFQ2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Gm42957D6RFQ2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Gm42957D6RFQ2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.57■■■□□ 2
Gm42957D6RFQ2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.57■■■□□ 2
Gm42957D6RFQ2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Gm42957D6RFQ2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Gm42957D6RFQ2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.53■■■□□ 2
Gm42957D6RFQ2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Gm42957D6RFQ2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Gm42957D6RFQ2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Gm42957D6RFQ2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.42■■□□□ 1.98
Gm42957D6RFQ2 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.38■■□□□ 1.97
Gm42957D6RFQ2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Gm42957D6RFQ2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.35■■□□□ 1.97
Gm42957D6RFQ2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Gm42957D6RFQ2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Gm42957D6RFQ2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Gm42957D6RFQ2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Gm42957D6RFQ2 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.27■■□□□ 1.96
Gm42957D6RFQ2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Gm42957D6RFQ2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Gm42957D6RFQ2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Gm42957D6RFQ2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Gm42957D6RFQ2 Gm16148-201ENSMUST00000119653 893 ntBASIC27.24■■□□□ 1.95
Gm42957D6RFQ2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Gm42957D6RFQ2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Gm42957D6RFQ2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Gm42957D6RFQ2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Gm42957D6RFQ2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Gm42957D6RFQ2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Gm42957D6RFQ2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Gm42957D6RFQ2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.12■■□□□ 1.93
Gm42957D6RFQ2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
Gm42957D6RFQ2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.09■■□□□ 1.93
Gm42957D6RFQ2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Gm42957D6RFQ2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Gm42957D6RFQ2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Gm42957D6RFQ2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Gm42957D6RFQ2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Gm42957D6RFQ2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Gm42957D6RFQ2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Gm42957D6RFQ2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.03■■□□□ 1.92
Gm42957D6RFQ2 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.03■■□□□ 1.92
Gm42957D6RFQ2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Gm42957D6RFQ2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27■■□□□ 1.91
Gm42957D6RFQ2 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.98■■□□□ 1.91
Gm42957D6RFQ2 Gm45855-201ENSMUST00000212546 880 ntBASIC26.95■■□□□ 1.9
Gm42957D6RFQ2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.94■■□□□ 1.9
Gm42957D6RFQ2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Gm42957D6RFQ2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Gm42957D6RFQ2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Gm42957D6RFQ2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Gm42957D6RFQ2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Gm42957D6RFQ2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.87■■□□□ 1.89
Gm42957D6RFQ2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Gm42957D6RFQ2 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.84■■□□□ 1.89
Gm42957D6RFQ2 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.83■■□□□ 1.89
Gm42957D6RFQ2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.83■■□□□ 1.89
Gm42957D6RFQ2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Gm42957D6RFQ2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
Gm42957D6RFQ2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Gm42957D6RFQ2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.79■■□□□ 1.88
Gm42957D6RFQ2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Gm42957D6RFQ2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.78■■□□□ 1.88
Gm42957D6RFQ2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Gm42957D6RFQ2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Gm42957D6RFQ2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Gm42957D6RFQ2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Gm42957D6RFQ2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Gm42957D6RFQ2 Peli2-204ENSMUST00000226513 1320 ntBASIC26.7■■□□□ 1.87
Gm42957D6RFQ2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
Gm42957D6RFQ2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Gm42957D6RFQ2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Gm42957D6RFQ2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Gm42957D6RFQ2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Gm42957D6RFQ2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.67■■□□□ 1.86
Gm42957D6RFQ2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Gm42957D6RFQ2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Gm42957D6RFQ2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Gm42957D6RFQ2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.62■■□□□ 1.85
Gm42957D6RFQ2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms