Protein–RNA interactions for Protein: D3YYI8

Gm10093, Histone deacetylase, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10093D3YYI8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC33.15■■■□□ 2.9
Gm10093D3YYI8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.14■■■□□ 2.9
Gm10093D3YYI8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC33.07■■■□□ 2.89
Gm10093D3YYI8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.07■■■□□ 2.88
Gm10093D3YYI8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Gm10093D3YYI8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Gm10093D3YYI8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Gm10093D3YYI8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
Gm10093D3YYI8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Gm10093D3YYI8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Gm10093D3YYI8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Gm10093D3YYI8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Gm10093D3YYI8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.82■■■□□ 2.84
Gm10093D3YYI8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Gm10093D3YYI8 Gm25238-201ENSMUST00000174914 89 ntBASIC32.77■■■□□ 2.84
Gm10093D3YYI8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Gm10093D3YYI8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.76■■■□□ 2.83
Gm10093D3YYI8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.75■■■□□ 2.83
Gm10093D3YYI8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Gm10093D3YYI8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC32.71■■■□□ 2.83
Gm10093D3YYI8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Gm10093D3YYI8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.68■■■□□ 2.82
Gm10093D3YYI8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Gm10093D3YYI8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
Gm10093D3YYI8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Gm10093D3YYI8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Gm10093D3YYI8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.52■■■□□ 2.8
Gm10093D3YYI8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Gm10093D3YYI8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.45■■■□□ 2.79
Gm10093D3YYI8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
Gm10093D3YYI8 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.43■■■□□ 2.78
Gm10093D3YYI8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.42■■■□□ 2.78
Gm10093D3YYI8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC32.41■■■□□ 2.78
Gm10093D3YYI8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Gm10093D3YYI8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Gm10093D3YYI8 Gm2415-204ENSMUST00000190235 2004 ntBASIC32.3■■■□□ 2.76
Gm10093D3YYI8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Gm10093D3YYI8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
Gm10093D3YYI8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Gm10093D3YYI8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Gm10093D3YYI8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Gm10093D3YYI8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC32.21■■■□□ 2.75
Gm10093D3YYI8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Gm10093D3YYI8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.2■■■□□ 2.75
Gm10093D3YYI8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Gm10093D3YYI8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
Gm10093D3YYI8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Gm10093D3YYI8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Gm10093D3YYI8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Gm10093D3YYI8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.12■■■□□ 2.73
Gm10093D3YYI8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Gm10093D3YYI8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
Gm10093D3YYI8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Gm10093D3YYI8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Gm10093D3YYI8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.03■■■□□ 2.72
Gm10093D3YYI8 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.03■■■□□ 2.72
Gm10093D3YYI8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Gm10093D3YYI8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.99■■■□□ 2.71
Gm10093D3YYI8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Gm10093D3YYI8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Gm10093D3YYI8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.95■■■□□ 2.71
Gm10093D3YYI8 Rab21-202ENSMUST00000218831 843 ntBASIC31.91■■■□□ 2.7
Gm10093D3YYI8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Gm10093D3YYI8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.89■■■□□ 2.7
Gm10093D3YYI8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Gm10093D3YYI8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
Gm10093D3YYI8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Gm10093D3YYI8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.84■■■□□ 2.69
Gm10093D3YYI8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Gm10093D3YYI8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Gm10093D3YYI8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Gm10093D3YYI8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Gm10093D3YYI8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Gm10093D3YYI8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Gm10093D3YYI8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.74■■■□□ 2.67
Gm10093D3YYI8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Gm10093D3YYI8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Gm10093D3YYI8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Gm10093D3YYI8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.66
Gm10093D3YYI8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.69■■■□□ 2.66
Gm10093D3YYI8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
Gm10093D3YYI8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Gm10093D3YYI8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.65■■■□□ 2.66
Gm10093D3YYI8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Gm10093D3YYI8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.64■■■□□ 2.66
Gm10093D3YYI8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Gm10093D3YYI8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Gm10093D3YYI8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Gm10093D3YYI8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Gm10093D3YYI8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Gm10093D3YYI8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Gm10093D3YYI8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.53■■■□□ 2.64
Gm10093D3YYI8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Gm10093D3YYI8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Gm10093D3YYI8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Gm10093D3YYI8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Gm10093D3YYI8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Gm10093D3YYI8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Gm10093D3YYI8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Gm10093D3YYI8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms