Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Syce3B5KM66 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
Syce3B5KM66 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Syce3B5KM66 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Syce3B5KM66 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.41■■■□□ 2.62
Syce3B5KM66 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Syce3B5KM66 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Syce3B5KM66 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.23■■■□□ 2.59
Syce3B5KM66 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Syce3B5KM66 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.19■■■□□ 2.58
Syce3B5KM66 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Syce3B5KM66 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Syce3B5KM66 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Syce3B5KM66 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Syce3B5KM66 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Syce3B5KM66 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Syce3B5KM66 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Syce3B5KM66 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
Syce3B5KM66 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.96■■■□□ 2.55
Syce3B5KM66 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Syce3B5KM66 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.93■■■□□ 2.54
Syce3B5KM66 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Syce3B5KM66 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Syce3B5KM66 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.84■■■□□ 2.53
Syce3B5KM66 Gm27325-201ENSMUST00000175467 74 ntBASIC30.78■■■□□ 2.52
Syce3B5KM66 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Syce3B5KM66 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Syce3B5KM66 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.65■■■□□ 2.5
Syce3B5KM66 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Syce3B5KM66 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Syce3B5KM66 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Syce3B5KM66 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Syce3B5KM66 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Syce3B5KM66 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Syce3B5KM66 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Syce3B5KM66 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Syce3B5KM66 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Syce3B5KM66 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Syce3B5KM66 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Syce3B5KM66 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
Syce3B5KM66 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Syce3B5KM66 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Syce3B5KM66 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Syce3B5KM66 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.52■■■□□ 2.48
Syce3B5KM66 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Syce3B5KM66 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Syce3B5KM66 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Syce3B5KM66 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Syce3B5KM66 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.46■■■□□ 2.47
Syce3B5KM66 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Syce3B5KM66 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Syce3B5KM66 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Syce3B5KM66 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.4■■■□□ 2.46
Syce3B5KM66 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.35■■■□□ 2.45
Syce3B5KM66 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Syce3B5KM66 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.32■■■□□ 2.44
Syce3B5KM66 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Syce3B5KM66 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Syce3B5KM66 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Syce3B5KM66 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Syce3B5KM66 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.29■■■□□ 2.44
Syce3B5KM66 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Syce3B5KM66 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Syce3B5KM66 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Syce3B5KM66 Zxda-201ENSMUST00000117281 2621 ntBASIC30.24■■■□□ 2.43
Syce3B5KM66 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Syce3B5KM66 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.15■■■□□ 2.42
Syce3B5KM66 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.15■■■□□ 2.42
Syce3B5KM66 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Syce3B5KM66 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Syce3B5KM66 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.12■■■□□ 2.41
Syce3B5KM66 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Syce3B5KM66 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Syce3B5KM66 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.11■■■□□ 2.41
Syce3B5KM66 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Syce3B5KM66 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Syce3B5KM66 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
Syce3B5KM66 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Syce3B5KM66 Gm6206-201ENSMUST00000133472 2199 ntBASIC30.08■■■□□ 2.41
Syce3B5KM66 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Syce3B5KM66 Gm25238-201ENSMUST00000174914 89 ntBASIC30.05■■■□□ 2.4
Syce3B5KM66 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Syce3B5KM66 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Syce3B5KM66 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
Syce3B5KM66 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.02■■■□□ 2.4
Syce3B5KM66 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC30.02■■■□□ 2.4
Syce3B5KM66 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Syce3B5KM66 Gm9905-201ENSMUST00000065740 1845 ntBASIC30■■■□□ 2.39
Syce3B5KM66 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Syce3B5KM66 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Syce3B5KM66 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Syce3B5KM66 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Syce3B5KM66 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Syce3B5KM66 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Syce3B5KM66 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Syce3B5KM66 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Syce3B5KM66 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
Syce3B5KM66 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Syce3B5KM66 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Syce3B5KM66 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms