Protein–RNA interactions for Protein: B1AUC4

Ube2u, Ubiquitin-conjugating enzyme E2U (putative), mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2uB1AUC4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC41.41■■■■■ 4.22
Ube2uB1AUC4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC41.39■■■■■ 4.22
Ube2uB1AUC4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC41.38■■■■■ 4.21
Ube2uB1AUC4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC41.36■■■■■ 4.21
Ube2uB1AUC4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC41.34■■■■■ 4.21
Ube2uB1AUC4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC41.23■■■■■ 4.19
Ube2uB1AUC4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC41.21■■■■■ 4.19
Ube2uB1AUC4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
Ube2uB1AUC4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC41.16■■■■■ 4.18
Ube2uB1AUC4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC41.12■■■■■ 4.17
Ube2uB1AUC4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC41.09■■■■■ 4.17
Ube2uB1AUC4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC41.08■■■■■ 4.17
Ube2uB1AUC4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC41.05■■■■■ 4.16
Ube2uB1AUC4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC41.04■■■■■ 4.16
Ube2uB1AUC4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC41.03■■■■■ 4.16
Ube2uB1AUC4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC40.94■■■■■ 4.14
Ube2uB1AUC4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC40.93■■■■■ 4.14
Ube2uB1AUC4 Gm17082-201ENSMUST00000166043 1091 ntBASIC40.91■■■■■ 4.14
Ube2uB1AUC4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC40.9■■■■■ 4.14
Ube2uB1AUC4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC40.9■■■■■ 4.14
Ube2uB1AUC4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC40.86■■■■■ 4.13
Ube2uB1AUC4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC40.86■■■■■ 4.13
Ube2uB1AUC4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC40.83■■■■■ 4.13
Ube2uB1AUC4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC40.8■■■■■ 4.12
Ube2uB1AUC4 Gm27322-201ENSMUST00000184007 104 ntBASIC40.79■■■■■ 4.12
Ube2uB1AUC4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC40.79■■■■■ 4.12
Ube2uB1AUC4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC40.78■■■■■ 4.12
Ube2uB1AUC4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC40.75■■■■■ 4.11
Ube2uB1AUC4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC40.69■■■■■ 4.1
Ube2uB1AUC4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC40.58■■■■■ 4.09
Ube2uB1AUC4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC40.51■■■■■ 4.08
Ube2uB1AUC4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC40.5■■■■■ 4.07
Ube2uB1AUC4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC40.45■■■■■ 4.07
Ube2uB1AUC4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC40.43■■■■■ 4.06
Ube2uB1AUC4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC40.39■■■■■ 4.06
Ube2uB1AUC4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC40.38■■■■■ 4.05
Ube2uB1AUC4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
Ube2uB1AUC4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
Ube2uB1AUC4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC40.27■■■■■ 4.04
Ube2uB1AUC4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
Ube2uB1AUC4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC40.22■■■■■ 4.03
Ube2uB1AUC4 AL845457.1-201ENSMUST00000197244 68 ntBASIC40.22■■■■■ 4.03
Ube2uB1AUC4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
Ube2uB1AUC4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
Ube2uB1AUC4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
Ube2uB1AUC4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC40.15■■■■■ 4.02
Ube2uB1AUC4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC40.12■■■■■ 4.01
Ube2uB1AUC4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC40.1■■■■■ 4.01
Ube2uB1AUC4 Zfp131-207ENSMUST00000224946 1783 ntBASIC40.08■■■■■ 4.01
Ube2uB1AUC4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC40.07■■■■■ 4.01
Ube2uB1AUC4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC40.07■■■■■ 4.01
Ube2uB1AUC4 Gm24804-201ENSMUST00000174982 85 ntBASIC40.06■■■■■ 4
Ube2uB1AUC4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC40.06■■■■■ 4
Ube2uB1AUC4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC40.04■■■■■ 4
Ube2uB1AUC4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC40.02■■■■■ 4
Ube2uB1AUC4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC40.01■■■■■ 4
Ube2uB1AUC4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
Ube2uB1AUC4 AC166822.3-201ENSMUST00000227394 661 ntBASIC39.96■■■■□ 3.99
Ube2uB1AUC4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC39.92■■■■□ 3.98
Ube2uB1AUC4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC39.88■■■■□ 3.97
Ube2uB1AUC4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
Ube2uB1AUC4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC39.82■■■■□ 3.96
Ube2uB1AUC4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC39.79■■■■□ 3.96
Ube2uB1AUC4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC39.79■■■■□ 3.96
Ube2uB1AUC4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
Ube2uB1AUC4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC39.75■■■■□ 3.95
Ube2uB1AUC4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC39.65■■■■□ 3.94
Ube2uB1AUC4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
Ube2uB1AUC4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC39.6■■■■□ 3.93
Ube2uB1AUC4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC39.57■■■■□ 3.93
Ube2uB1AUC4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
Ube2uB1AUC4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
Ube2uB1AUC4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
Ube2uB1AUC4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
Ube2uB1AUC4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC39.46■■■■□ 3.91
Ube2uB1AUC4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
Ube2uB1AUC4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Ube2uB1AUC4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC39.43■■■■□ 3.9
Ube2uB1AUC4 Mipep-204ENSMUST00000225043 1548 ntBASIC39.42■■■■□ 3.9
Ube2uB1AUC4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC39.42■■■■□ 3.9
Ube2uB1AUC4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.9
Ube2uB1AUC4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
Ube2uB1AUC4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC39.37■■■■□ 3.89
Ube2uB1AUC4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
Ube2uB1AUC4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC39.34■■■■□ 3.89
Ube2uB1AUC4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
Ube2uB1AUC4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
Ube2uB1AUC4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC39.27■■■■□ 3.88
Ube2uB1AUC4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
Ube2uB1AUC4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC39.2■■■■□ 3.87
Ube2uB1AUC4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
Ube2uB1AUC4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
Ube2uB1AUC4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC39.19■■■■□ 3.86
Ube2uB1AUC4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
Ube2uB1AUC4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
Ube2uB1AUC4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC39.16■■■■□ 3.86
Ube2uB1AUC4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
Ube2uB1AUC4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC39.08■■■■□ 3.85
Ube2uB1AUC4 Peli2-204ENSMUST00000226513 1320 ntBASIC39.04■■■■□ 3.84
Ube2uB1AUC4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms