Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.79■■□□□ 1.72
Slc9a6A1L3P4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Slc9a6A1L3P4 Rab21-202ENSMUST00000218831 843 ntBASIC25.76■■□□□ 1.71
Slc9a6A1L3P4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Slc9a6A1L3P4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Slc9a6A1L3P4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.68■■□□□ 1.7
Slc9a6A1L3P4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Slc9a6A1L3P4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
Slc9a6A1L3P4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Slc9a6A1L3P4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.62■■□□□ 1.69
Slc9a6A1L3P4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Slc9a6A1L3P4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Slc9a6A1L3P4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Slc9a6A1L3P4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Slc9a6A1L3P4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Slc9a6A1L3P4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Slc9a6A1L3P4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Slc9a6A1L3P4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Slc9a6A1L3P4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Slc9a6A1L3P4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Slc9a6A1L3P4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.41■■□□□ 1.66
Slc9a6A1L3P4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.39■■□□□ 1.66
Slc9a6A1L3P4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.37■■□□□ 1.65
Slc9a6A1L3P4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Slc9a6A1L3P4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Slc9a6A1L3P4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Slc9a6A1L3P4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Slc9a6A1L3P4 Gm25262-201ENSMUST00000174934 133 ntBASIC25.34■■□□□ 1.65
Slc9a6A1L3P4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Slc9a6A1L3P4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Slc9a6A1L3P4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.31■■□□□ 1.64
Slc9a6A1L3P4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slc9a6A1L3P4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Slc9a6A1L3P4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Slc9a6A1L3P4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Slc9a6A1L3P4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Slc9a6A1L3P4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
Slc9a6A1L3P4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Slc9a6A1L3P4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Slc9a6A1L3P4 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.21■■□□□ 1.63
Slc9a6A1L3P4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Slc9a6A1L3P4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Slc9a6A1L3P4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Slc9a6A1L3P4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
Slc9a6A1L3P4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Slc9a6A1L3P4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Slc9a6A1L3P4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Slc9a6A1L3P4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Slc9a6A1L3P4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Slc9a6A1L3P4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.01■■□□□ 1.59
Slc9a6A1L3P4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Slc9a6A1L3P4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Slc9a6A1L3P4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Slc9a6A1L3P4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Slc9a6A1L3P4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Slc9a6A1L3P4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Slc9a6A1L3P4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Slc9a6A1L3P4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.85■■□□□ 1.57
Slc9a6A1L3P4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Slc9a6A1L3P4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.82■■□□□ 1.56
Slc9a6A1L3P4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Slc9a6A1L3P4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Slc9a6A1L3P4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Slc9a6A1L3P4 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.8■■□□□ 1.56
Slc9a6A1L3P4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.76■■□□□ 1.55
Slc9a6A1L3P4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
Slc9a6A1L3P4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Slc9a6A1L3P4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Slc9a6A1L3P4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Slc9a6A1L3P4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Slc9a6A1L3P4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.72■■□□□ 1.55
Slc9a6A1L3P4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Slc9a6A1L3P4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Slc9a6A1L3P4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Slc9a6A1L3P4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Slc9a6A1L3P4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Slc9a6A1L3P4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Slc9a6A1L3P4 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.63■■□□□ 1.53
Slc9a6A1L3P4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Slc9a6A1L3P4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Slc9a6A1L3P4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Slc9a6A1L3P4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Slc9a6A1L3P4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.61■■□□□ 1.53
Slc9a6A1L3P4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Slc9a6A1L3P4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Slc9a6A1L3P4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Slc9a6A1L3P4 Gm27322-201ENSMUST00000184007 104 ntBASIC24.59■■□□□ 1.53
Slc9a6A1L3P4 Mipep-204ENSMUST00000225043 1548 ntBASIC24.58■■□□□ 1.53
Slc9a6A1L3P4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Slc9a6A1L3P4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Slc9a6A1L3P4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Slc9a6A1L3P4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Slc9a6A1L3P4 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.52■■□□□ 1.52
Slc9a6A1L3P4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Slc9a6A1L3P4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Slc9a6A1L3P4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.5■■□□□ 1.51
Slc9a6A1L3P4 Gm26115-201ENSMUST00000175605 87 ntBASIC24.5■■□□□ 1.51
Slc9a6A1L3P4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.5■■□□□ 1.51
Slc9a6A1L3P4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Slc9a6A1L3P4 Gm8109-201ENSMUST00000194076 746 ntBASIC24.43■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms