Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.56■■■□□ 2.64
Ccdc112A0AUP1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccdc112A0AUP1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccdc112A0AUP1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.54■■■□□ 2.64
Ccdc112A0AUP1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc112A0AUP1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.44■■■□□ 2.62
Ccdc112A0AUP1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Ccdc112A0AUP1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ccdc112A0AUP1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc112A0AUP1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc112A0AUP1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc112A0AUP1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ccdc112A0AUP1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Ccdc112A0AUP1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc112A0AUP1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.2■■■□□ 2.59
Ccdc112A0AUP1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc112A0AUP1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
Ccdc112A0AUP1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.14■■■□□ 2.58
Ccdc112A0AUP1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Ccdc112A0AUP1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.12■■■□□ 2.57
Ccdc112A0AUP1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc112A0AUP1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.07■■■□□ 2.56
Ccdc112A0AUP1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Ccdc112A0AUP1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ccdc112A0AUP1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Ccdc112A0AUP1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc112A0AUP1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.93■■■□□ 2.54
Ccdc112A0AUP1 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.92■■■□□ 2.54
Ccdc112A0AUP1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ccdc112A0AUP1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
Ccdc112A0AUP1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
Ccdc112A0AUP1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
Ccdc112A0AUP1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ccdc112A0AUP1 Rab21-202ENSMUST00000218831 843 ntBASIC30.83■■■□□ 2.53
Ccdc112A0AUP1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc112A0AUP1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
Ccdc112A0AUP1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ccdc112A0AUP1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc112A0AUP1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Ccdc112A0AUP1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Ccdc112A0AUP1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ccdc112A0AUP1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Ccdc112A0AUP1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.64■■■□□ 2.5
Ccdc112A0AUP1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc112A0AUP1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc112A0AUP1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc112A0AUP1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Ccdc112A0AUP1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.6■■■□□ 2.49
Ccdc112A0AUP1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Ccdc112A0AUP1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.58■■■□□ 2.49
Ccdc112A0AUP1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.58■■■□□ 2.49
Ccdc112A0AUP1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc112A0AUP1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc112A0AUP1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ccdc112A0AUP1 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.52■■■□□ 2.48
Ccdc112A0AUP1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
Ccdc112A0AUP1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc112A0AUP1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc112A0AUP1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc112A0AUP1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc112A0AUP1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc112A0AUP1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
Ccdc112A0AUP1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Ccdc112A0AUP1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Ccdc112A0AUP1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc112A0AUP1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc112A0AUP1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc112A0AUP1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.39■■■□□ 2.46
Ccdc112A0AUP1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.37■■■□□ 2.45
Ccdc112A0AUP1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc112A0AUP1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc112A0AUP1 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.29■■■□□ 2.44
Ccdc112A0AUP1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc112A0AUP1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.24■■■□□ 2.43
Ccdc112A0AUP1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Ccdc112A0AUP1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ccdc112A0AUP1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
Ccdc112A0AUP1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc112A0AUP1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc112A0AUP1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc112A0AUP1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc112A0AUP1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.14■■■□□ 2.42
Ccdc112A0AUP1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ccdc112A0AUP1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ccdc112A0AUP1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.08■■■□□ 2.41
Ccdc112A0AUP1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc112A0AUP1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Ccdc112A0AUP1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ccdc112A0AUP1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ccdc112A0AUP1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Ccdc112A0AUP1 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.02■■■□□ 2.4
Ccdc112A0AUP1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ccdc112A0AUP1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Ccdc112A0AUP1 Mipep-204ENSMUST00000225043 1548 ntBASIC29.95■■■□□ 2.38
Ccdc112A0AUP1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Ccdc112A0AUP1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
Ccdc112A0AUP1 Gm25262-201ENSMUST00000174934 133 ntBASIC29.92■■■□□ 2.38
Ccdc112A0AUP1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Ccdc112A0AUP1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ccdc112A0AUP1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms