Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Igkv3-9A0A140T8P4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Igkv3-9A0A140T8P4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv3-9A0A140T8P4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv3-9A0A140T8P4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.9■□□□□ 0.62
Igkv3-9A0A140T8P4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv3-9A0A140T8P4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv3-9A0A140T8P4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.88■□□□□ 0.61
Igkv3-9A0A140T8P4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv3-9A0A140T8P4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv3-9A0A140T8P4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv3-9A0A140T8P4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv3-9A0A140T8P4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv3-9A0A140T8P4 Rab21-202ENSMUST00000218831 843 ntBASIC18.78■□□□□ 0.6
Igkv3-9A0A140T8P4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv3-9A0A140T8P4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv3-9A0A140T8P4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.76■□□□□ 0.59
Igkv3-9A0A140T8P4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igkv3-9A0A140T8P4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Igkv3-9A0A140T8P4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Igkv3-9A0A140T8P4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.68■□□□□ 0.58
Igkv3-9A0A140T8P4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Igkv3-9A0A140T8P4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igkv3-9A0A140T8P4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Igkv3-9A0A140T8P4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv3-9A0A140T8P4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.63■□□□□ 0.57
Igkv3-9A0A140T8P4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.62■□□□□ 0.57
Igkv3-9A0A140T8P4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Igkv3-9A0A140T8P4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv3-9A0A140T8P4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv3-9A0A140T8P4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv3-9A0A140T8P4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv3-9A0A140T8P4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv3-9A0A140T8P4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv3-9A0A140T8P4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv3-9A0A140T8P4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.57■□□□□ 0.56
Igkv3-9A0A140T8P4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv3-9A0A140T8P4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.55■□□□□ 0.56
Igkv3-9A0A140T8P4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Igkv3-9A0A140T8P4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv3-9A0A140T8P4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv3-9A0A140T8P4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv3-9A0A140T8P4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Igkv3-9A0A140T8P4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Igkv3-9A0A140T8P4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv3-9A0A140T8P4 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.46■□□□□ 0.55
Igkv3-9A0A140T8P4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv3-9A0A140T8P4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Igkv3-9A0A140T8P4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv3-9A0A140T8P4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv3-9A0A140T8P4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv3-9A0A140T8P4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Igkv3-9A0A140T8P4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv3-9A0A140T8P4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.41■□□□□ 0.54
Igkv3-9A0A140T8P4 Gm25262-201ENSMUST00000174934 133 ntBASIC18.4■□□□□ 0.54
Igkv3-9A0A140T8P4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv3-9A0A140T8P4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv3-9A0A140T8P4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv3-9A0A140T8P4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv3-9A0A140T8P4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Igkv3-9A0A140T8P4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv3-9A0A140T8P4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv3-9A0A140T8P4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv3-9A0A140T8P4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.36■□□□□ 0.53
Igkv3-9A0A140T8P4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Igkv3-9A0A140T8P4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Igkv3-9A0A140T8P4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Igkv3-9A0A140T8P4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv3-9A0A140T8P4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv3-9A0A140T8P4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv3-9A0A140T8P4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv3-9A0A140T8P4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv3-9A0A140T8P4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.27■□□□□ 0.52
Igkv3-9A0A140T8P4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv3-9A0A140T8P4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv3-9A0A140T8P4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv3-9A0A140T8P4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv3-9A0A140T8P4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv3-9A0A140T8P4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv3-9A0A140T8P4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv3-9A0A140T8P4 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.16■□□□□ 0.5
Igkv3-9A0A140T8P4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv3-9A0A140T8P4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Igkv3-9A0A140T8P4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv3-9A0A140T8P4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Igkv3-9A0A140T8P4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv3-9A0A140T8P4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv3-9A0A140T8P4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv3-9A0A140T8P4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv3-9A0A140T8P4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.09■□□□□ 0.49
Igkv3-9A0A140T8P4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Igkv3-9A0A140T8P4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv3-9A0A140T8P4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv3-9A0A140T8P4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igkv3-9A0A140T8P4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv3-9A0A140T8P4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv3-9A0A140T8P4 Mipep-204ENSMUST00000225043 1548 ntBASIC18.03■□□□□ 0.48
Igkv3-9A0A140T8P4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv3-9A0A140T8P4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Igkv3-9A0A140T8P4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms