Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trbv13-2A0A140T8N6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.18■□□□□ 0.66
Trbv13-2A0A140T8N6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.17■□□□□ 0.66
Trbv13-2A0A140T8N6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv13-2A0A140T8N6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv13-2A0A140T8N6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv13-2A0A140T8N6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv13-2A0A140T8N6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv13-2A0A140T8N6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv13-2A0A140T8N6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trbv13-2A0A140T8N6 Gm25262-201ENSMUST00000174934 133 ntBASIC18.99■□□□□ 0.63
Trbv13-2A0A140T8N6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv13-2A0A140T8N6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.98■□□□□ 0.63
Trbv13-2A0A140T8N6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.98■□□□□ 0.63
Trbv13-2A0A140T8N6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv13-2A0A140T8N6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.96■□□□□ 0.63
Trbv13-2A0A140T8N6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv13-2A0A140T8N6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv13-2A0A140T8N6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv13-2A0A140T8N6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv13-2A0A140T8N6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trbv13-2A0A140T8N6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv13-2A0A140T8N6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv13-2A0A140T8N6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv13-2A0A140T8N6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv13-2A0A140T8N6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv13-2A0A140T8N6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv13-2A0A140T8N6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv13-2A0A140T8N6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv13-2A0A140T8N6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv13-2A0A140T8N6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv13-2A0A140T8N6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.81■□□□□ 0.6
Trbv13-2A0A140T8N6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv13-2A0A140T8N6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv13-2A0A140T8N6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv13-2A0A140T8N6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv13-2A0A140T8N6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv13-2A0A140T8N6 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.76■□□□□ 0.59
Trbv13-2A0A140T8N6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trbv13-2A0A140T8N6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Trbv13-2A0A140T8N6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv13-2A0A140T8N6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv13-2A0A140T8N6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trbv13-2A0A140T8N6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.63■□□□□ 0.57
Trbv13-2A0A140T8N6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv13-2A0A140T8N6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.61■□□□□ 0.57
Trbv13-2A0A140T8N6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv13-2A0A140T8N6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.6■□□□□ 0.57
Trbv13-2A0A140T8N6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv13-2A0A140T8N6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trbv13-2A0A140T8N6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.57■□□□□ 0.56
Trbv13-2A0A140T8N6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv13-2A0A140T8N6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv13-2A0A140T8N6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trbv13-2A0A140T8N6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv13-2A0A140T8N6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv13-2A0A140T8N6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv13-2A0A140T8N6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv13-2A0A140T8N6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv13-2A0A140T8N6 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.51■□□□□ 0.55
Trbv13-2A0A140T8N6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv13-2A0A140T8N6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv13-2A0A140T8N6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv13-2A0A140T8N6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trbv13-2A0A140T8N6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv13-2A0A140T8N6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv13-2A0A140T8N6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv13-2A0A140T8N6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trbv13-2A0A140T8N6 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.44■□□□□ 0.54
Trbv13-2A0A140T8N6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv13-2A0A140T8N6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trbv13-2A0A140T8N6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Trbv13-2A0A140T8N6 Gm27322-201ENSMUST00000184007 104 ntBASIC18.39■□□□□ 0.53
Trbv13-2A0A140T8N6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv13-2A0A140T8N6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.38■□□□□ 0.53
Trbv13-2A0A140T8N6 Gm26115-201ENSMUST00000175605 87 ntBASIC18.37■□□□□ 0.53
Trbv13-2A0A140T8N6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv13-2A0A140T8N6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv13-2A0A140T8N6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trbv13-2A0A140T8N6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv13-2A0A140T8N6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv13-2A0A140T8N6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
Trbv13-2A0A140T8N6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv13-2A0A140T8N6 Gm8109-201ENSMUST00000194076 746 ntBASIC18.32■□□□□ 0.52
Trbv13-2A0A140T8N6 Mipep-204ENSMUST00000225043 1548 ntBASIC18.31■□□□□ 0.52
Trbv13-2A0A140T8N6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv13-2A0A140T8N6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv13-2A0A140T8N6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv13-2A0A140T8N6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv13-2A0A140T8N6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.29■□□□□ 0.52
Trbv13-2A0A140T8N6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv13-2A0A140T8N6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.25■□□□□ 0.51
Trbv13-2A0A140T8N6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv13-2A0A140T8N6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv13-2A0A140T8N6 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.24■□□□□ 0.51
Trbv13-2A0A140T8N6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv13-2A0A140T8N6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trbv13-2A0A140T8N6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.2■□□□□ 0.5
Trbv13-2A0A140T8N6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trbv13-2A0A140T8N6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms