Protein–RNA interactions for Protein: A0A140LJC2

Gm1043, Predicted gene 1043, mousemouse

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm1043A0A140LJC2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC43,59■■■■■ 4,57
Gm1043A0A140LJC2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC43,58■■■■■ 4,57
Gm1043A0A140LJC2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC43,57■■■■■ 4,57
Gm1043A0A140LJC2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC43,56■■■■■ 4,56
Gm1043A0A140LJC2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC43,53■■■■■ 4,56
Gm1043A0A140LJC2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC43,48■■■■■ 4,55
Gm1043A0A140LJC2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC43,47■■■■■ 4,55
Gm1043A0A140LJC2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC43,32■■■■■ 4,53
Gm1043A0A140LJC2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC43,28■■■■■ 4,52
Gm1043A0A140LJC2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC43,15■■■■■ 4,5
Gm1043A0A140LJC2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC43,14■■■■■ 4,5
Gm1043A0A140LJC2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC43,05■■■■■ 4,48
Gm1043A0A140LJC2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC43,04■■■■■ 4,48
Gm1043A0A140LJC2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC43■■■■■ 4,47
Gm1043A0A140LJC2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC42,97■■■■■ 4,47
Gm1043A0A140LJC2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC42,96■■■■■ 4,47
Gm1043A0A140LJC2 Gm27322-201ENSMUST00000184007 104 ntBASIC42,94■■■■■ 4,46
Gm1043A0A140LJC2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC42,94■■■■■ 4,46
Gm1043A0A140LJC2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC42,94■■■■■ 4,46
Gm1043A0A140LJC2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC42,86■■■■■ 4,45
Gm1043A0A140LJC2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC42,82■■■■■ 4,45
Gm1043A0A140LJC2 Gm24804-201ENSMUST00000174982 85 ntBASIC42,81■■■■■ 4,44
Gm1043A0A140LJC2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC42,74■■■■■ 4,43
Gm1043A0A140LJC2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC42,68■■■■■ 4,42
Gm1043A0A140LJC2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC42,68■■■■■ 4,42
Gm1043A0A140LJC2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC42,65■■■■■ 4,42
Gm1043A0A140LJC2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC42,65■■■■■ 4,42
Gm1043A0A140LJC2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC42,63■■■■■ 4,42
Gm1043A0A140LJC2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC42,63■■■■■ 4,41
Gm1043A0A140LJC2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC42,59■■■■■ 4,41
Gm1043A0A140LJC2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC42,53■■■■■ 4,4
Gm1043A0A140LJC2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC42,53■■■■■ 4,4
Gm1043A0A140LJC2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC42,49■■■■■ 4,39
Gm1043A0A140LJC2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC42,48■■■■■ 4,39
Gm1043A0A140LJC2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC42,46■■■■■ 4,39
Gm1043A0A140LJC2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC42,45■■■■■ 4,39
Gm1043A0A140LJC2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC42,41■■■■■ 4,38
Gm1043A0A140LJC2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC42,41■■■■■ 4,38
Gm1043A0A140LJC2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC42,34■■■■■ 4,37
Gm1043A0A140LJC2 AL845457.1-201ENSMUST00000197244 68 ntBASIC42,32■■■■■ 4,37
Gm1043A0A140LJC2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC42,3■■■■■ 4,36
Gm1043A0A140LJC2 AC166822.3-201ENSMUST00000227394 661 ntBASIC42,29■■■■■ 4,36
Gm1043A0A140LJC2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC42,27■■■■■ 4,36
Gm1043A0A140LJC2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC42,21■■■■■ 4,35
Gm1043A0A140LJC2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC42,17■■■■■ 4,34
Gm1043A0A140LJC2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC42,16■■■■■ 4,34
Gm1043A0A140LJC2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC42,16■■■■■ 4,34
Gm1043A0A140LJC2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC42,12■■■■■ 4,33
Gm1043A0A140LJC2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC42,11■■■■■ 4,33
Gm1043A0A140LJC2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC42,07■■■■■ 4,33
Gm1043A0A140LJC2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC42,07■■■■■ 4,33
Gm1043A0A140LJC2 Zfp131-207ENSMUST00000224946 1783 ntBASIC42,02■■■■■ 4,32
Gm1043A0A140LJC2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC42,02■■■■■ 4,32
Gm1043A0A140LJC2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC42,01■■■■■ 4,31
Gm1043A0A140LJC2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC41,97■■■■■ 4,31
Gm1043A0A140LJC2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC41,97■■■■■ 4,31
Gm1043A0A140LJC2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC41,97■■■■■ 4,31
Gm1043A0A140LJC2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC41,94■■■■■ 4,31
Gm1043A0A140LJC2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC41,85■■■■■ 4,29
Gm1043A0A140LJC2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC41,83■■■■■ 4,29
Gm1043A0A140LJC2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC41,8■■■■■ 4,28
Gm1043A0A140LJC2 Zfp131-205ENSMUST00000223812 663 ntBASIC41,78■■■■■ 4,28
Gm1043A0A140LJC2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC41,77■■■■■ 4,28
Gm1043A0A140LJC2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC41,76■■■■■ 4,28
Gm1043A0A140LJC2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC41,73■■■■■ 4,27
Gm1043A0A140LJC2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC41,73■■■■■ 4,27
Gm1043A0A140LJC2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC41,71■■■■■ 4,27
Gm1043A0A140LJC2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC41,69■■■■■ 4,27
Gm1043A0A140LJC2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC41,68■■■■■ 4,26
Gm1043A0A140LJC2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC41,58■■■■■ 4,25
Gm1043A0A140LJC2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC41,56■■■■■ 4,24
Gm1043A0A140LJC2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC41,47■■■■■ 4,23
Gm1043A0A140LJC2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC41,43■■■■■ 4,22
Gm1043A0A140LJC2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC41,43■■■■■ 4,22
Gm1043A0A140LJC2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC41,42■■■■■ 4,22
Gm1043A0A140LJC2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC41,41■■■■■ 4,22
Gm1043A0A140LJC2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC41,4■■■■■ 4,22
Gm1043A0A140LJC2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC41,4■■■■■ 4,22
Gm1043A0A140LJC2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC41,39■■■■■ 4,22
Gm1043A0A140LJC2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC41,34■■■■■ 4,21
Gm1043A0A140LJC2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC41,32■■■■■ 4,21
Gm1043A0A140LJC2 Peli2-204ENSMUST00000226513 1320 ntBASIC41,28■■■■■ 4,2
Gm1043A0A140LJC2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC41,27■■■■■ 4,2
Gm1043A0A140LJC2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC41,26■■■■■ 4,2
Gm1043A0A140LJC2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC41,26■■■■■ 4,2
Gm1043A0A140LJC2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC41,26■■■■■ 4,19
Gm1043A0A140LJC2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC41,26■■■■■ 4,19
Gm1043A0A140LJC2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC41,23■■■■■ 4,19
Gm1043A0A140LJC2 Mipep-204ENSMUST00000225043 1548 ntBASIC41,21■■■■■ 4,19
Gm1043A0A140LJC2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC41,2■■■■■ 4,19
Gm1043A0A140LJC2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC41,2■■■■■ 4,19
Gm1043A0A140LJC2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC41,19■■■■■ 4,18
Gm1043A0A140LJC2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC41,17■■■■■ 4,18
Gm1043A0A140LJC2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC41,14■■■■■ 4,18
Gm1043A0A140LJC2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC41,1■■■■■ 4,17
Gm1043A0A140LJC2 Gm16148-201ENSMUST00000119653 893 ntBASIC41,1■■■■■ 4,17
Gm1043A0A140LJC2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC41,1■■■■■ 4,17
Gm1043A0A140LJC2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC41,09■■■■■ 4,17
Gm1043A0A140LJC2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC41,09■■■■■ 4,17
Gm1043A0A140LJC2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC41,04■■■■■ 4,16
Retrieved 100 of 76,532 protein–RNA pairs in 9,9 ms