Protein–RNA interactions for Protein: A0A0G2JDU0

Igkv8-34, Immunoglobulin kappa variable 8-34 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-34A0A0G2JDU0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Igkv8-34A0A0G2JDU0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv8-34A0A0G2JDU0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Igkv8-34A0A0G2JDU0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.23■□□□□ 0.67
Igkv8-34A0A0G2JDU0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv8-34A0A0G2JDU0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv8-34A0A0G2JDU0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv8-34A0A0G2JDU0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv8-34A0A0G2JDU0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv8-34A0A0G2JDU0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv8-34A0A0G2JDU0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.18■□□□□ 0.66
Igkv8-34A0A0G2JDU0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.17■□□□□ 0.66
Igkv8-34A0A0G2JDU0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Igkv8-34A0A0G2JDU0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.16■□□□□ 0.66
Igkv8-34A0A0G2JDU0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.13■□□□□ 0.65
Igkv8-34A0A0G2JDU0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Igkv8-34A0A0G2JDU0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.04■□□□□ 0.64
Igkv8-34A0A0G2JDU0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv8-34A0A0G2JDU0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.04■□□□□ 0.64
Igkv8-34A0A0G2JDU0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Igkv8-34A0A0G2JDU0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Igkv8-34A0A0G2JDU0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Igkv8-34A0A0G2JDU0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igkv8-34A0A0G2JDU0 Gm26115-201ENSMUST00000175605 87 ntBASIC18.97■□□□□ 0.63
Igkv8-34A0A0G2JDU0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Igkv8-34A0A0G2JDU0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv8-34A0A0G2JDU0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv8-34A0A0G2JDU0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv8-34A0A0G2JDU0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Igkv8-34A0A0G2JDU0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv8-34A0A0G2JDU0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv8-34A0A0G2JDU0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Igkv8-34A0A0G2JDU0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv8-34A0A0G2JDU0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv8-34A0A0G2JDU0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv8-34A0A0G2JDU0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.86■□□□□ 0.61
Igkv8-34A0A0G2JDU0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv8-34A0A0G2JDU0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv8-34A0A0G2JDU0 Gm8109-201ENSMUST00000194076 746 ntBASIC18.84■□□□□ 0.61
Igkv8-34A0A0G2JDU0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv8-34A0A0G2JDU0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv8-34A0A0G2JDU0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Igkv8-34A0A0G2JDU0 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.8■□□□□ 0.6
Igkv8-34A0A0G2JDU0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Igkv8-34A0A0G2JDU0 Gm27322-201ENSMUST00000184007 104 ntBASIC18.8■□□□□ 0.6
Igkv8-34A0A0G2JDU0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv8-34A0A0G2JDU0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igkv8-34A0A0G2JDU0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igkv8-34A0A0G2JDU0 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.73■□□□□ 0.59
Igkv8-34A0A0G2JDU0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Igkv8-34A0A0G2JDU0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.72■□□□□ 0.59
Igkv8-34A0A0G2JDU0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.72■□□□□ 0.59
Igkv8-34A0A0G2JDU0 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.69■□□□□ 0.58
Igkv8-34A0A0G2JDU0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Igkv8-34A0A0G2JDU0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igkv8-34A0A0G2JDU0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv8-34A0A0G2JDU0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv8-34A0A0G2JDU0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv8-34A0A0G2JDU0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv8-34A0A0G2JDU0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv8-34A0A0G2JDU0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv8-34A0A0G2JDU0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Igkv8-34A0A0G2JDU0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv8-34A0A0G2JDU0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv8-34A0A0G2JDU0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv8-34A0A0G2JDU0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv8-34A0A0G2JDU0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv8-34A0A0G2JDU0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv8-34A0A0G2JDU0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv8-34A0A0G2JDU0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Igkv8-34A0A0G2JDU0 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.54■□□□□ 0.56
Igkv8-34A0A0G2JDU0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv8-34A0A0G2JDU0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv8-34A0A0G2JDU0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Igkv8-34A0A0G2JDU0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Igkv8-34A0A0G2JDU0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv8-34A0A0G2JDU0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Igkv8-34A0A0G2JDU0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv8-34A0A0G2JDU0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv8-34A0A0G2JDU0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv8-34A0A0G2JDU0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.46■□□□□ 0.55
Igkv8-34A0A0G2JDU0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv8-34A0A0G2JDU0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv8-34A0A0G2JDU0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv8-34A0A0G2JDU0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv8-34A0A0G2JDU0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.42■□□□□ 0.54
Igkv8-34A0A0G2JDU0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv8-34A0A0G2JDU0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv8-34A0A0G2JDU0 Mipep-204ENSMUST00000225043 1548 ntBASIC18.39■□□□□ 0.54
Igkv8-34A0A0G2JDU0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv8-34A0A0G2JDU0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv8-34A0A0G2JDU0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv8-34A0A0G2JDU0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv8-34A0A0G2JDU0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv8-34A0A0G2JDU0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv8-34A0A0G2JDU0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.33■□□□□ 0.52
Igkv8-34A0A0G2JDU0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv8-34A0A0G2JDU0 Gm24804-201ENSMUST00000174982 85 ntBASIC18.32■□□□□ 0.52
Igkv8-34A0A0G2JDU0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv8-34A0A0G2JDU0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms