Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav19A0A0B4J1K4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav19A0A0B4J1K4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav19A0A0B4J1K4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trav19A0A0B4J1K4 Gm27325-201ENSMUST00000175467 74 ntBASIC20.28■□□□□ 0.84
Trav19A0A0B4J1K4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.27■□□□□ 0.84
Trav19A0A0B4J1K4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav19A0A0B4J1K4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav19A0A0B4J1K4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav19A0A0B4J1K4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav19A0A0B4J1K4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav19A0A0B4J1K4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trav19A0A0B4J1K4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav19A0A0B4J1K4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.1■□□□□ 0.81
Trav19A0A0B4J1K4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav19A0A0B4J1K4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav19A0A0B4J1K4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trav19A0A0B4J1K4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav19A0A0B4J1K4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav19A0A0B4J1K4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav19A0A0B4J1K4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav19A0A0B4J1K4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav19A0A0B4J1K4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trav19A0A0B4J1K4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.01■□□□□ 0.79
Trav19A0A0B4J1K4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trav19A0A0B4J1K4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.98■□□□□ 0.79
Trav19A0A0B4J1K4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.94■□□□□ 0.78
Trav19A0A0B4J1K4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav19A0A0B4J1K4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav19A0A0B4J1K4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav19A0A0B4J1K4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.91■□□□□ 0.78
Trav19A0A0B4J1K4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav19A0A0B4J1K4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav19A0A0B4J1K4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav19A0A0B4J1K4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav19A0A0B4J1K4 Gm25238-201ENSMUST00000174914 89 ntBASIC19.84■□□□□ 0.77
Trav19A0A0B4J1K4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.83■□□□□ 0.77
Trav19A0A0B4J1K4 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.83■□□□□ 0.76
Trav19A0A0B4J1K4 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.81■□□□□ 0.76
Trav19A0A0B4J1K4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.81■□□□□ 0.76
Trav19A0A0B4J1K4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav19A0A0B4J1K4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav19A0A0B4J1K4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav19A0A0B4J1K4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.76■□□□□ 0.75
Trav19A0A0B4J1K4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav19A0A0B4J1K4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav19A0A0B4J1K4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav19A0A0B4J1K4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav19A0A0B4J1K4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trav19A0A0B4J1K4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.71■□□□□ 0.75
Trav19A0A0B4J1K4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav19A0A0B4J1K4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav19A0A0B4J1K4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Trav19A0A0B4J1K4 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.69■□□□□ 0.74
Trav19A0A0B4J1K4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav19A0A0B4J1K4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Trav19A0A0B4J1K4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trav19A0A0B4J1K4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.61■□□□□ 0.73
Trav19A0A0B4J1K4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav19A0A0B4J1K4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.61■□□□□ 0.73
Trav19A0A0B4J1K4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav19A0A0B4J1K4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav19A0A0B4J1K4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav19A0A0B4J1K4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Trav19A0A0B4J1K4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav19A0A0B4J1K4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav19A0A0B4J1K4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav19A0A0B4J1K4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav19A0A0B4J1K4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav19A0A0B4J1K4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav19A0A0B4J1K4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav19A0A0B4J1K4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav19A0A0B4J1K4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav19A0A0B4J1K4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav19A0A0B4J1K4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Trav19A0A0B4J1K4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.5■□□□□ 0.71
Trav19A0A0B4J1K4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav19A0A0B4J1K4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav19A0A0B4J1K4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav19A0A0B4J1K4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.46■□□□□ 0.71
Trav19A0A0B4J1K4 Rab21-202ENSMUST00000218831 843 ntBASIC19.46■□□□□ 0.71
Trav19A0A0B4J1K4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav19A0A0B4J1K4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.45■□□□□ 0.7
Trav19A0A0B4J1K4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav19A0A0B4J1K4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.44■□□□□ 0.7
Trav19A0A0B4J1K4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav19A0A0B4J1K4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.42■□□□□ 0.7
Trav19A0A0B4J1K4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav19A0A0B4J1K4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav19A0A0B4J1K4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trav19A0A0B4J1K4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.39■□□□□ 0.69
Trav19A0A0B4J1K4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav19A0A0B4J1K4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trav19A0A0B4J1K4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav19A0A0B4J1K4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav19A0A0B4J1K4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav19A0A0B4J1K4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav19A0A0B4J1K4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav19A0A0B4J1K4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav19A0A0B4J1K4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms