Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29,18■■■□□ 2,26
Igkv5-45A0A0B4J1J1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29,17■■■□□ 2,26
Igkv5-45A0A0B4J1J1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29,14■■■□□ 2,25
Igkv5-45A0A0B4J1J1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29,14■■■□□ 2,25
Igkv5-45A0A0B4J1J1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29,12■■■□□ 2,25
Igkv5-45A0A0B4J1J1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29,09■■■□□ 2,25
Igkv5-45A0A0B4J1J1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29,09■■■□□ 2,25
Igkv5-45A0A0B4J1J1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29,07■■■□□ 2,24
Igkv5-45A0A0B4J1J1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29,02■■■□□ 2,24
Igkv5-45A0A0B4J1J1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29,02■■■□□ 2,24
Igkv5-45A0A0B4J1J1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29,01■■■□□ 2,24
Igkv5-45A0A0B4J1J1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29,01■■■□□ 2,23
Igkv5-45A0A0B4J1J1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,23
Igkv5-45A0A0B4J1J1 Gm26115-201ENSMUST00000175605 87 ntBASIC28,98■■■□□ 2,23
Igkv5-45A0A0B4J1J1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28,92■■■□□ 2,22
Igkv5-45A0A0B4J1J1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28,9■■■□□ 2,22
Igkv5-45A0A0B4J1J1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28,89■■■□□ 2,22
Igkv5-45A0A0B4J1J1 Gm8109-201ENSMUST00000194076 746 ntBASIC28,88■■■□□ 2,21
Igkv5-45A0A0B4J1J1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28,88■■■□□ 2,21
Igkv5-45A0A0B4J1J1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28,86■■■□□ 2,21
Igkv5-45A0A0B4J1J1 Gm17082-201ENSMUST00000166043 1091 ntBASIC28,77■■■□□ 2,2
Igkv5-45A0A0B4J1J1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28,76■■■□□ 2,2
Igkv5-45A0A0B4J1J1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28,75■■■□□ 2,19
Igkv5-45A0A0B4J1J1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28,74■■■□□ 2,19
Igkv5-45A0A0B4J1J1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28,71■■■□□ 2,19
Igkv5-45A0A0B4J1J1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Igkv5-45A0A0B4J1J1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28,67■■■□□ 2,18
Igkv5-45A0A0B4J1J1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28,67■■■□□ 2,18
Igkv5-45A0A0B4J1J1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
Igkv5-45A0A0B4J1J1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28,63■■■□□ 2,17
Igkv5-45A0A0B4J1J1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28,57■■■□□ 2,16
Igkv5-45A0A0B4J1J1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28,55■■■□□ 2,16
Igkv5-45A0A0B4J1J1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28,55■■■□□ 2,16
Igkv5-45A0A0B4J1J1 Gm27322-201ENSMUST00000184007 104 ntBASIC28,52■■■□□ 2,16
Igkv5-45A0A0B4J1J1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28,52■■■□□ 2,16
Igkv5-45A0A0B4J1J1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28,51■■■□□ 2,15
Igkv5-45A0A0B4J1J1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28,5■■■□□ 2,15
Igkv5-45A0A0B4J1J1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28,48■■■□□ 2,15
Igkv5-45A0A0B4J1J1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28,48■■■□□ 2,15
Igkv5-45A0A0B4J1J1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Igkv5-45A0A0B4J1J1 Zfp131-207ENSMUST00000224946 1783 ntBASIC28,42■■■□□ 2,14
Igkv5-45A0A0B4J1J1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28,4■■■□□ 2,14
Igkv5-45A0A0B4J1J1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28,38■■■□□ 2,13
Igkv5-45A0A0B4J1J1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28,37■■■□□ 2,13
Igkv5-45A0A0B4J1J1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Igkv5-45A0A0B4J1J1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28,36■■■□□ 2,13
Igkv5-45A0A0B4J1J1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28,35■■■□□ 2,13
Igkv5-45A0A0B4J1J1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28,33■■■□□ 2,12
Igkv5-45A0A0B4J1J1 AL845457.1-201ENSMUST00000197244 68 ntBASIC28,32■■■□□ 2,12
Igkv5-45A0A0B4J1J1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28,31■■■□□ 2,12
Igkv5-45A0A0B4J1J1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28,3■■■□□ 2,12
Igkv5-45A0A0B4J1J1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28,27■■■□□ 2,12
Igkv5-45A0A0B4J1J1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28,25■■■□□ 2,11
Igkv5-45A0A0B4J1J1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28,2■■■□□ 2,1
Igkv5-45A0A0B4J1J1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28,18■■■□□ 2,1
Igkv5-45A0A0B4J1J1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28,16■■■□□ 2,1
Igkv5-45A0A0B4J1J1 AC166822.3-201ENSMUST00000227394 661 ntBASIC28,14■■■□□ 2,1
Igkv5-45A0A0B4J1J1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28,12■■■□□ 2,09
Igkv5-45A0A0B4J1J1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28,1■■■□□ 2,09
Igkv5-45A0A0B4J1J1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28,09■■■□□ 2,09
Igkv5-45A0A0B4J1J1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28,06■■■□□ 2,08
Igkv5-45A0A0B4J1J1 Gm24804-201ENSMUST00000174982 85 ntBASIC28,04■■■□□ 2,08
Igkv5-45A0A0B4J1J1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28,01■■■□□ 2,07
Igkv5-45A0A0B4J1J1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28,01■■■□□ 2,07
Igkv5-45A0A0B4J1J1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27,99■■■□□ 2,07
Igkv5-45A0A0B4J1J1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27,95■■■□□ 2,07
Igkv5-45A0A0B4J1J1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27,95■■■□□ 2,07
Igkv5-45A0A0B4J1J1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27,95■■■□□ 2,06
Igkv5-45A0A0B4J1J1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27,94■■■□□ 2,06
Igkv5-45A0A0B4J1J1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27,93■■■□□ 2,06
Igkv5-45A0A0B4J1J1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27,93■■■□□ 2,06
Igkv5-45A0A0B4J1J1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27,93■■■□□ 2,06
Igkv5-45A0A0B4J1J1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27,92■■■□□ 2,06
Igkv5-45A0A0B4J1J1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27,92■■■□□ 2,06
Igkv5-45A0A0B4J1J1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27,87■■■□□ 2,05
Igkv5-45A0A0B4J1J1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27,85■■■□□ 2,05
Igkv5-45A0A0B4J1J1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27,84■■■□□ 2,05
Igkv5-45A0A0B4J1J1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27,83■■■□□ 2,05
Igkv5-45A0A0B4J1J1 Mipep-204ENSMUST00000225043 1548 ntBASIC27,81■■■□□ 2,04
Igkv5-45A0A0B4J1J1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27,79■■■□□ 2,04
Igkv5-45A0A0B4J1J1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27,75■■■□□ 2,03
Igkv5-45A0A0B4J1J1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27,74■■■□□ 2,03
Igkv5-45A0A0B4J1J1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27,73■■■□□ 2,03
Igkv5-45A0A0B4J1J1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27,7■■■□□ 2,02
Igkv5-45A0A0B4J1J1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27,69■■■□□ 2,02
Igkv5-45A0A0B4J1J1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27,69■■■□□ 2,02
Igkv5-45A0A0B4J1J1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27,69■■■□□ 2,02
Igkv5-45A0A0B4J1J1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27,68■■■□□ 2,02
Igkv5-45A0A0B4J1J1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27,67■■■□□ 2,02
Igkv5-45A0A0B4J1J1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27,66■■■□□ 2,02
Igkv5-45A0A0B4J1J1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27,66■■■□□ 2,02
Igkv5-45A0A0B4J1J1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27,64■■■□□ 2,02
Igkv5-45A0A0B4J1J1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27,63■■■□□ 2,01
Igkv5-45A0A0B4J1J1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27,59■■■□□ 2,01
Igkv5-45A0A0B4J1J1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27,58■■■□□ 2,01
Igkv5-45A0A0B4J1J1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27,57■■■□□ 2
Igkv5-45A0A0B4J1J1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27,57■■■□□ 2
Igkv5-45A0A0B4J1J1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27,57■■■□□ 2
Igkv5-45A0A0B4J1J1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27,57■■■□□ 2
Igkv5-45A0A0B4J1J1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27,57■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 8,3 ms