Protein–RNA interactions for Protein: A0A0A6YXJ9

Ighv1-12, Immunoglobulin heavy variable V1-12 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-12A0A0A6YXJ9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ighv1-12A0A0A6YXJ9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.76■□□□□ 0.91
Ighv1-12A0A0A6YXJ9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv1-12A0A0A6YXJ9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv1-12A0A0A6YXJ9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-12A0A0A6YXJ9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.72■□□□□ 0.91
Ighv1-12A0A0A6YXJ9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ighv1-12A0A0A6YXJ9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ighv1-12A0A0A6YXJ9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv1-12A0A0A6YXJ9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ighv1-12A0A0A6YXJ9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv1-12A0A0A6YXJ9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv1-12A0A0A6YXJ9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ighv1-12A0A0A6YXJ9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-12A0A0A6YXJ9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.53■□□□□ 0.88
Ighv1-12A0A0A6YXJ9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-12A0A0A6YXJ9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-12A0A0A6YXJ9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.51■□□□□ 0.87
Ighv1-12A0A0A6YXJ9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.5■□□□□ 0.87
Ighv1-12A0A0A6YXJ9 Gm25262-201ENSMUST00000174934 133 ntBASIC20.5■□□□□ 0.87
Ighv1-12A0A0A6YXJ9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv1-12A0A0A6YXJ9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-12A0A0A6YXJ9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-12A0A0A6YXJ9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ighv1-12A0A0A6YXJ9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv1-12A0A0A6YXJ9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv1-12A0A0A6YXJ9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv1-12A0A0A6YXJ9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-12A0A0A6YXJ9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.42■□□□□ 0.86
Ighv1-12A0A0A6YXJ9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-12A0A0A6YXJ9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv1-12A0A0A6YXJ9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv1-12A0A0A6YXJ9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ighv1-12A0A0A6YXJ9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ighv1-12A0A0A6YXJ9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ighv1-12A0A0A6YXJ9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ighv1-12A0A0A6YXJ9 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.35■□□□□ 0.85
Ighv1-12A0A0A6YXJ9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ighv1-12A0A0A6YXJ9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ighv1-12A0A0A6YXJ9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv1-12A0A0A6YXJ9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv1-12A0A0A6YXJ9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.19■□□□□ 0.82
Ighv1-12A0A0A6YXJ9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ighv1-12A0A0A6YXJ9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ighv1-12A0A0A6YXJ9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ighv1-12A0A0A6YXJ9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv1-12A0A0A6YXJ9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv1-12A0A0A6YXJ9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv1-12A0A0A6YXJ9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.12■□□□□ 0.81
Ighv1-12A0A0A6YXJ9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv1-12A0A0A6YXJ9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ighv1-12A0A0A6YXJ9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv1-12A0A0A6YXJ9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ighv1-12A0A0A6YXJ9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.1■□□□□ 0.81
Ighv1-12A0A0A6YXJ9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ighv1-12A0A0A6YXJ9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Ighv1-12A0A0A6YXJ9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv1-12A0A0A6YXJ9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv1-12A0A0A6YXJ9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv1-12A0A0A6YXJ9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ighv1-12A0A0A6YXJ9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ighv1-12A0A0A6YXJ9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-12A0A0A6YXJ9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-12A0A0A6YXJ9 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.03■□□□□ 0.8
Ighv1-12A0A0A6YXJ9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.01■□□□□ 0.79
Ighv1-12A0A0A6YXJ9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ighv1-12A0A0A6YXJ9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-12A0A0A6YXJ9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-12A0A0A6YXJ9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-12A0A0A6YXJ9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-12A0A0A6YXJ9 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.93■□□□□ 0.78
Ighv1-12A0A0A6YXJ9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ighv1-12A0A0A6YXJ9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ighv1-12A0A0A6YXJ9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ighv1-12A0A0A6YXJ9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.9■□□□□ 0.78
Ighv1-12A0A0A6YXJ9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ighv1-12A0A0A6YXJ9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ighv1-12A0A0A6YXJ9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.89■□□□□ 0.77
Ighv1-12A0A0A6YXJ9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Ighv1-12A0A0A6YXJ9 Gm27322-201ENSMUST00000184007 104 ntBASIC19.88■□□□□ 0.77
Ighv1-12A0A0A6YXJ9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ighv1-12A0A0A6YXJ9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-12A0A0A6YXJ9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-12A0A0A6YXJ9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-12A0A0A6YXJ9 Mipep-204ENSMUST00000225043 1548 ntBASIC19.83■□□□□ 0.77
Ighv1-12A0A0A6YXJ9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ighv1-12A0A0A6YXJ9 Gm26115-201ENSMUST00000175605 87 ntBASIC19.82■□□□□ 0.76
Ighv1-12A0A0A6YXJ9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Ighv1-12A0A0A6YXJ9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-12A0A0A6YXJ9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ighv1-12A0A0A6YXJ9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-12A0A0A6YXJ9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-12A0A0A6YXJ9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv1-12A0A0A6YXJ9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-12A0A0A6YXJ9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.76■□□□□ 0.75
Ighv1-12A0A0A6YXJ9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-12A0A0A6YXJ9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.75■□□□□ 0.75
Ighv1-12A0A0A6YXJ9 Gm8109-201ENSMUST00000194076 746 ntBASIC19.75■□□□□ 0.75
Ighv1-12A0A0A6YXJ9 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.74■□□□□ 0.75
Ighv1-12A0A0A6YXJ9 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms