Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.11■□□□□ 0.97
Ighv1-52A0A0A6YXC3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ighv1-52A0A0A6YXC3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-52A0A0A6YXC3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ighv1-52A0A0A6YXC3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.04■□□□□ 0.96
Ighv1-52A0A0A6YXC3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.04■□□□□ 0.96
Ighv1-52A0A0A6YXC3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-52A0A0A6YXC3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ighv1-52A0A0A6YXC3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-52A0A0A6YXC3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.99■□□□□ 0.95
Ighv1-52A0A0A6YXC3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-52A0A0A6YXC3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv1-52A0A0A6YXC3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-52A0A0A6YXC3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-52A0A0A6YXC3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-52A0A0A6YXC3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ighv1-52A0A0A6YXC3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-52A0A0A6YXC3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv1-52A0A0A6YXC3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv1-52A0A0A6YXC3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.84■□□□□ 0.93
Ighv1-52A0A0A6YXC3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-52A0A0A6YXC3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-52A0A0A6YXC3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-52A0A0A6YXC3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ighv1-52A0A0A6YXC3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv1-52A0A0A6YXC3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv1-52A0A0A6YXC3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv1-52A0A0A6YXC3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.72■□□□□ 0.91
Ighv1-52A0A0A6YXC3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.71■□□□□ 0.91
Ighv1-52A0A0A6YXC3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ighv1-52A0A0A6YXC3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.68■□□□□ 0.9
Ighv1-52A0A0A6YXC3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv1-52A0A0A6YXC3 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.66■□□□□ 0.9
Ighv1-52A0A0A6YXC3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv1-52A0A0A6YXC3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv1-52A0A0A6YXC3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv1-52A0A0A6YXC3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv1-52A0A0A6YXC3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ighv1-52A0A0A6YXC3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.6■□□□□ 0.89
Ighv1-52A0A0A6YXC3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ighv1-52A0A0A6YXC3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv1-52A0A0A6YXC3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ighv1-52A0A0A6YXC3 Gm26115-201ENSMUST00000175605 87 ntBASIC20.53■□□□□ 0.88
Ighv1-52A0A0A6YXC3 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.51■□□□□ 0.87
Ighv1-52A0A0A6YXC3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv1-52A0A0A6YXC3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv1-52A0A0A6YXC3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-52A0A0A6YXC3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv1-52A0A0A6YXC3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv1-52A0A0A6YXC3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv1-52A0A0A6YXC3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ighv1-52A0A0A6YXC3 Gm27322-201ENSMUST00000184007 104 ntBASIC20.46■□□□□ 0.87
Ighv1-52A0A0A6YXC3 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.46■□□□□ 0.87
Ighv1-52A0A0A6YXC3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Ighv1-52A0A0A6YXC3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv1-52A0A0A6YXC3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv1-52A0A0A6YXC3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ighv1-52A0A0A6YXC3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv1-52A0A0A6YXC3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-52A0A0A6YXC3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-52A0A0A6YXC3 Gm8109-201ENSMUST00000194076 746 ntBASIC20.42■□□□□ 0.86
Ighv1-52A0A0A6YXC3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-52A0A0A6YXC3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-52A0A0A6YXC3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.41■□□□□ 0.86
Ighv1-52A0A0A6YXC3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ighv1-52A0A0A6YXC3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
Ighv1-52A0A0A6YXC3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-52A0A0A6YXC3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ighv1-52A0A0A6YXC3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ighv1-52A0A0A6YXC3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-52A0A0A6YXC3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ighv1-52A0A0A6YXC3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-52A0A0A6YXC3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-52A0A0A6YXC3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ighv1-52A0A0A6YXC3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.24■□□□□ 0.83
Ighv1-52A0A0A6YXC3 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.24■□□□□ 0.83
Ighv1-52A0A0A6YXC3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ighv1-52A0A0A6YXC3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv1-52A0A0A6YXC3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ighv1-52A0A0A6YXC3 Mipep-204ENSMUST00000225043 1548 ntBASIC20.2■□□□□ 0.82
Ighv1-52A0A0A6YXC3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ighv1-52A0A0A6YXC3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-52A0A0A6YXC3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-52A0A0A6YXC3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ighv1-52A0A0A6YXC3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv1-52A0A0A6YXC3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ighv1-52A0A0A6YXC3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ighv1-52A0A0A6YXC3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ighv1-52A0A0A6YXC3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv1-52A0A0A6YXC3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-52A0A0A6YXC3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-52A0A0A6YXC3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv1-52A0A0A6YXC3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv1-52A0A0A6YXC3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv1-52A0A0A6YXC3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv1-52A0A0A6YXC3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.02■□□□□ 0.8
Ighv1-52A0A0A6YXC3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ighv1-52A0A0A6YXC3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-52A0A0A6YXC3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-52A0A0A6YXC3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms