Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.55■■□□□ 1.2
Ighv1-20A0A0A6YX66 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Ighv1-20A0A0A6YX66 Gm26115-201ENSMUST00000175605 87 ntBASIC22.53■■□□□ 1.2
Ighv1-20A0A0A6YX66 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ighv1-20A0A0A6YX66 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.52■■□□□ 1.2
Ighv1-20A0A0A6YX66 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ighv1-20A0A0A6YX66 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ighv1-20A0A0A6YX66 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ighv1-20A0A0A6YX66 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ighv1-20A0A0A6YX66 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ighv1-20A0A0A6YX66 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ighv1-20A0A0A6YX66 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv1-20A0A0A6YX66 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ighv1-20A0A0A6YX66 Gm8109-201ENSMUST00000194076 746 ntBASIC22.38■■□□□ 1.17
Ighv1-20A0A0A6YX66 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.37■■□□□ 1.17
Ighv1-20A0A0A6YX66 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Ighv1-20A0A0A6YX66 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ighv1-20A0A0A6YX66 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ighv1-20A0A0A6YX66 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ighv1-20A0A0A6YX66 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.25■■□□□ 1.15
Ighv1-20A0A0A6YX66 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ighv1-20A0A0A6YX66 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Ighv1-20A0A0A6YX66 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.23■■□□□ 1.15
Ighv1-20A0A0A6YX66 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ighv1-20A0A0A6YX66 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ighv1-20A0A0A6YX66 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Ighv1-20A0A0A6YX66 Gm27322-201ENSMUST00000184007 104 ntBASIC22.16■■□□□ 1.14
Ighv1-20A0A0A6YX66 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Ighv1-20A0A0A6YX66 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
Ighv1-20A0A0A6YX66 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ighv1-20A0A0A6YX66 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ighv1-20A0A0A6YX66 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Ighv1-20A0A0A6YX66 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Ighv1-20A0A0A6YX66 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ighv1-20A0A0A6YX66 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22■■□□□ 1.11
Ighv1-20A0A0A6YX66 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ighv1-20A0A0A6YX66 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ighv1-20A0A0A6YX66 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ighv1-20A0A0A6YX66 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.95■■□□□ 1.1
Ighv1-20A0A0A6YX66 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv1-20A0A0A6YX66 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.92■■□□□ 1.1
Ighv1-20A0A0A6YX66 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ighv1-20A0A0A6YX66 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.9■■□□□ 1.1
Ighv1-20A0A0A6YX66 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ighv1-20A0A0A6YX66 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ighv1-20A0A0A6YX66 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ighv1-20A0A0A6YX66 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ighv1-20A0A0A6YX66 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ighv1-20A0A0A6YX66 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv1-20A0A0A6YX66 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv1-20A0A0A6YX66 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.81■■□□□ 1.08
Ighv1-20A0A0A6YX66 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.81■■□□□ 1.08
Ighv1-20A0A0A6YX66 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ighv1-20A0A0A6YX66 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ighv1-20A0A0A6YX66 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv1-20A0A0A6YX66 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.76■■□□□ 1.07
Ighv1-20A0A0A6YX66 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv1-20A0A0A6YX66 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv1-20A0A0A6YX66 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ighv1-20A0A0A6YX66 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.71■■□□□ 1.07
Ighv1-20A0A0A6YX66 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv1-20A0A0A6YX66 Gm24804-201ENSMUST00000174982 85 ntBASIC21.69■■□□□ 1.06
Ighv1-20A0A0A6YX66 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv1-20A0A0A6YX66 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv1-20A0A0A6YX66 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ighv1-20A0A0A6YX66 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ighv1-20A0A0A6YX66 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ighv1-20A0A0A6YX66 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ighv1-20A0A0A6YX66 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.62■■□□□ 1.05
Ighv1-20A0A0A6YX66 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv1-20A0A0A6YX66 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ighv1-20A0A0A6YX66 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ighv1-20A0A0A6YX66 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ighv1-20A0A0A6YX66 Mipep-204ENSMUST00000225043 1548 ntBASIC21.51■■□□□ 1.03
Ighv1-20A0A0A6YX66 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv1-20A0A0A6YX66 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv1-20A0A0A6YX66 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ighv1-20A0A0A6YX66 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv1-20A0A0A6YX66 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv1-20A0A0A6YX66 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv1-20A0A0A6YX66 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv1-20A0A0A6YX66 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ighv1-20A0A0A6YX66 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ighv1-20A0A0A6YX66 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ighv1-20A0A0A6YX66 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ighv1-20A0A0A6YX66 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ighv1-20A0A0A6YX66 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ighv1-20A0A0A6YX66 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ighv1-20A0A0A6YX66 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ighv1-20A0A0A6YX66 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv1-20A0A0A6YX66 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv1-20A0A0A6YX66 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv1-20A0A0A6YX66 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ighv1-20A0A0A6YX66 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv1-20A0A0A6YX66 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv1-20A0A0A6YX66 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv1-20A0A0A6YX66 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv1-20A0A0A6YX66 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.35■■□□□ 1.01
Ighv1-20A0A0A6YX66 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv1-20A0A0A6YX66 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms