Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.29■■□□□ 1.64
Trbc1A0A0A6YWV4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Trbc1A0A0A6YWV4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trbc1A0A0A6YWV4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Trbc1A0A0A6YWV4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Trbc1A0A0A6YWV4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trbc1A0A0A6YWV4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Trbc1A0A0A6YWV4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trbc1A0A0A6YWV4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trbc1A0A0A6YWV4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trbc1A0A0A6YWV4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.15■■□□□ 1.62
Trbc1A0A0A6YWV4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trbc1A0A0A6YWV4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.14■■□□□ 1.62
Trbc1A0A0A6YWV4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trbc1A0A0A6YWV4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trbc1A0A0A6YWV4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.1■■□□□ 1.61
Trbc1A0A0A6YWV4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trbc1A0A0A6YWV4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trbc1A0A0A6YWV4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Trbc1A0A0A6YWV4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.04■■□□□ 1.6
Trbc1A0A0A6YWV4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Trbc1A0A0A6YWV4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25■■□□□ 1.59
Trbc1A0A0A6YWV4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Trbc1A0A0A6YWV4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trbc1A0A0A6YWV4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Trbc1A0A0A6YWV4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Trbc1A0A0A6YWV4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.92■■□□□ 1.58
Trbc1A0A0A6YWV4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trbc1A0A0A6YWV4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trbc1A0A0A6YWV4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Trbc1A0A0A6YWV4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Trbc1A0A0A6YWV4 Gm26115-201ENSMUST00000175605 87 ntBASIC24.81■■□□□ 1.56
Trbc1A0A0A6YWV4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trbc1A0A0A6YWV4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trbc1A0A0A6YWV4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trbc1A0A0A6YWV4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trbc1A0A0A6YWV4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Trbc1A0A0A6YWV4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.69■■□□□ 1.54
Trbc1A0A0A6YWV4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trbc1A0A0A6YWV4 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.68■■□□□ 1.54
Trbc1A0A0A6YWV4 Gm8109-201ENSMUST00000194076 746 ntBASIC24.68■■□□□ 1.54
Trbc1A0A0A6YWV4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trbc1A0A0A6YWV4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trbc1A0A0A6YWV4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trbc1A0A0A6YWV4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trbc1A0A0A6YWV4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Trbc1A0A0A6YWV4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trbc1A0A0A6YWV4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trbc1A0A0A6YWV4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trbc1A0A0A6YWV4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trbc1A0A0A6YWV4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trbc1A0A0A6YWV4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Trbc1A0A0A6YWV4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Trbc1A0A0A6YWV4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Trbc1A0A0A6YWV4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Trbc1A0A0A6YWV4 Gm27322-201ENSMUST00000184007 104 ntBASIC24.53■■□□□ 1.52
Trbc1A0A0A6YWV4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Trbc1A0A0A6YWV4 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.52■■□□□ 1.52
Trbc1A0A0A6YWV4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.48■■□□□ 1.51
Trbc1A0A0A6YWV4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trbc1A0A0A6YWV4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.47■■□□□ 1.51
Trbc1A0A0A6YWV4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.47■■□□□ 1.51
Trbc1A0A0A6YWV4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trbc1A0A0A6YWV4 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.42■■□□□ 1.5
Trbc1A0A0A6YWV4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.42■■□□□ 1.5
Trbc1A0A0A6YWV4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trbc1A0A0A6YWV4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.4■■□□□ 1.5
Trbc1A0A0A6YWV4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Trbc1A0A0A6YWV4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trbc1A0A0A6YWV4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trbc1A0A0A6YWV4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trbc1A0A0A6YWV4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.34■■□□□ 1.49
Trbc1A0A0A6YWV4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trbc1A0A0A6YWV4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trbc1A0A0A6YWV4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trbc1A0A0A6YWV4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trbc1A0A0A6YWV4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Trbc1A0A0A6YWV4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trbc1A0A0A6YWV4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.24■■□□□ 1.47
Trbc1A0A0A6YWV4 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.24■■□□□ 1.47
Trbc1A0A0A6YWV4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trbc1A0A0A6YWV4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Trbc1A0A0A6YWV4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trbc1A0A0A6YWV4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Trbc1A0A0A6YWV4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Trbc1A0A0A6YWV4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Trbc1A0A0A6YWV4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trbc1A0A0A6YWV4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Trbc1A0A0A6YWV4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Trbc1A0A0A6YWV4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trbc1A0A0A6YWV4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Trbc1A0A0A6YWV4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Trbc1A0A0A6YWV4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trbc1A0A0A6YWV4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.03■■□□□ 1.44
Trbc1A0A0A6YWV4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trbc1A0A0A6YWV4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Trbc1A0A0A6YWV4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trbc1A0A0A6YWV4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Trbc1A0A0A6YWV4 Mipep-204ENSMUST00000225043 1548 ntBASIC24.01■■□□□ 1.43
Trbc1A0A0A6YWV4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms