Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav12-3A0A075B648 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav12-3A0A075B648 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav12-3A0A075B648 Gm15045-201ENSMUST00000117359 883 ntBASIC20.05■□□□□ 0.8
Trav12-3A0A075B648 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trav12-3A0A075B648 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav12-3A0A075B648 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav12-3A0A075B648 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav12-3A0A075B648 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav12-3A0A075B648 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav12-3A0A075B648 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trav12-3A0A075B648 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav12-3A0A075B648 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav12-3A0A075B648 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav12-3A0A075B648 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.84■□□□□ 0.77
Trav12-3A0A075B648 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav12-3A0A075B648 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav12-3A0A075B648 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav12-3A0A075B648 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav12-3A0A075B648 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trav12-3A0A075B648 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.79■□□□□ 0.76
Trav12-3A0A075B648 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav12-3A0A075B648 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12-3A0A075B648 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12-3A0A075B648 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.73■□□□□ 0.75
Trav12-3A0A075B648 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav12-3A0A075B648 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav12-3A0A075B648 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav12-3A0A075B648 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav12-3A0A075B648 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav12-3A0A075B648 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trav12-3A0A075B648 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12-3A0A075B648 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12-3A0A075B648 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12-3A0A075B648 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav12-3A0A075B648 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav12-3A0A075B648 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav12-3A0A075B648 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.63■□□□□ 0.73
Trav12-3A0A075B648 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav12-3A0A075B648 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trav12-3A0A075B648 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav12-3A0A075B648 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.58■□□□□ 0.72
Trav12-3A0A075B648 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-3A0A075B648 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12-3A0A075B648 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav12-3A0A075B648 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav12-3A0A075B648 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Trav12-3A0A075B648 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav12-3A0A075B648 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav12-3A0A075B648 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.5■□□□□ 0.71
Trav12-3A0A075B648 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav12-3A0A075B648 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav12-3A0A075B648 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav12-3A0A075B648 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
Trav12-3A0A075B648 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav12-3A0A075B648 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav12-3A0A075B648 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav12-3A0A075B648 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav12-3A0A075B648 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav12-3A0A075B648 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trav12-3A0A075B648 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav12-3A0A075B648 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav12-3A0A075B648 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trav12-3A0A075B648 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav12-3A0A075B648 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Trav12-3A0A075B648 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav12-3A0A075B648 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav12-3A0A075B648 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav12-3A0A075B648 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav12-3A0A075B648 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav12-3A0A075B648 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav12-3A0A075B648 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trav12-3A0A075B648 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav12-3A0A075B648 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav12-3A0A075B648 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav12-3A0A075B648 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav12-3A0A075B648 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trav12-3A0A075B648 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Trav12-3A0A075B648 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav12-3A0A075B648 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trav12-3A0A075B648 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav12-3A0A075B648 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.26■□□□□ 0.67
Trav12-3A0A075B648 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav12-3A0A075B648 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav12-3A0A075B648 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav12-3A0A075B648 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav12-3A0A075B648 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav12-3A0A075B648 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav12-3A0A075B648 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav12-3A0A075B648 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav12-3A0A075B648 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav12-3A0A075B648 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trav12-3A0A075B648 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12-3A0A075B648 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12-3A0A075B648 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12-3A0A075B648 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.19■□□□□ 0.66
Trav12-3A0A075B648 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav12-3A0A075B648 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Trav12-3A0A075B648 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav12-3A0A075B648 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms