Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav14n-3A0A075B645 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav14n-3A0A075B645 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav14n-3A0A075B645 Gm23366-201ENSMUST00000175022 89 ntBASIC20.62■□□□□ 0.89
Trav14n-3A0A075B645 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav14n-3A0A075B645 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Trav14n-3A0A075B645 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.57■□□□□ 0.88
Trav14n-3A0A075B645 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav14n-3A0A075B645 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav14n-3A0A075B645 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav14n-3A0A075B645 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav14n-3A0A075B645 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trav14n-3A0A075B645 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.44■□□□□ 0.86
Trav14n-3A0A075B645 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav14n-3A0A075B645 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav14n-3A0A075B645 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav14n-3A0A075B645 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav14n-3A0A075B645 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Trav14n-3A0A075B645 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav14n-3A0A075B645 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav14n-3A0A075B645 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Trav14n-3A0A075B645 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav14n-3A0A075B645 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.31■□□□□ 0.84
Trav14n-3A0A075B645 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.27■□□□□ 0.84
Trav14n-3A0A075B645 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav14n-3A0A075B645 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav14n-3A0A075B645 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav14n-3A0A075B645 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.22■□□□□ 0.83
Trav14n-3A0A075B645 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav14n-3A0A075B645 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.17■□□□□ 0.82
Trav14n-3A0A075B645 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trav14n-3A0A075B645 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trav14n-3A0A075B645 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav14n-3A0A075B645 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav14n-3A0A075B645 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.09■□□□□ 0.81
Trav14n-3A0A075B645 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav14n-3A0A075B645 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav14n-3A0A075B645 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav14n-3A0A075B645 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav14n-3A0A075B645 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav14n-3A0A075B645 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav14n-3A0A075B645 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trav14n-3A0A075B645 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trav14n-3A0A075B645 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav14n-3A0A075B645 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav14n-3A0A075B645 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav14n-3A0A075B645 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trav14n-3A0A075B645 Zxda-201ENSMUST00000117281 2621 ntBASIC20.01■□□□□ 0.79
Trav14n-3A0A075B645 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trav14n-3A0A075B645 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav14n-3A0A075B645 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav14n-3A0A075B645 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav14n-3A0A075B645 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.97■□□□□ 0.79
Trav14n-3A0A075B645 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav14n-3A0A075B645 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav14n-3A0A075B645 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav14n-3A0A075B645 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.92■□□□□ 0.78
Trav14n-3A0A075B645 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav14n-3A0A075B645 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav14n-3A0A075B645 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav14n-3A0A075B645 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.9■□□□□ 0.78
Trav14n-3A0A075B645 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav14n-3A0A075B645 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav14n-3A0A075B645 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav14n-3A0A075B645 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav14n-3A0A075B645 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav14n-3A0A075B645 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav14n-3A0A075B645 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.83■□□□□ 0.76
Trav14n-3A0A075B645 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav14n-3A0A075B645 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.81■□□□□ 0.76
Trav14n-3A0A075B645 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav14n-3A0A075B645 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav14n-3A0A075B645 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav14n-3A0A075B645 Gm27325-201ENSMUST00000175467 74 ntBASIC19.79■□□□□ 0.76
Trav14n-3A0A075B645 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav14n-3A0A075B645 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav14n-3A0A075B645 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav14n-3A0A075B645 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav14n-3A0A075B645 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav14n-3A0A075B645 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav14n-3A0A075B645 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav14n-3A0A075B645 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav14n-3A0A075B645 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav14n-3A0A075B645 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav14n-3A0A075B645 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav14n-3A0A075B645 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav14n-3A0A075B645 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav14n-3A0A075B645 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.69■□□□□ 0.74
Trav14n-3A0A075B645 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trav14n-3A0A075B645 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav14n-3A0A075B645 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav14n-3A0A075B645 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav14n-3A0A075B645 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav14n-3A0A075B645 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav14n-3A0A075B645 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav14n-3A0A075B645 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav14n-3A0A075B645 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav14n-3A0A075B645 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trav14n-3A0A075B645 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav14n-3A0A075B645 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms