Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav13-1A0A075B644 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav13-1A0A075B644 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trav13-1A0A075B644 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.44■□□□□ 0.7
Trav13-1A0A075B644 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav13-1A0A075B644 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.42■□□□□ 0.7
Trav13-1A0A075B644 Gm8109-201ENSMUST00000194076 746 ntBASIC19.41■□□□□ 0.7
Trav13-1A0A075B644 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trav13-1A0A075B644 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav13-1A0A075B644 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.36■□□□□ 0.69
Trav13-1A0A075B644 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav13-1A0A075B644 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav13-1A0A075B644 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav13-1A0A075B644 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13-1A0A075B644 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13-1A0A075B644 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13-1A0A075B644 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav13-1A0A075B644 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Trav13-1A0A075B644 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Trav13-1A0A075B644 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.21■□□□□ 0.67
Trav13-1A0A075B644 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav13-1A0A075B644 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.2■□□□□ 0.66
Trav13-1A0A075B644 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav13-1A0A075B644 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav13-1A0A075B644 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav13-1A0A075B644 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav13-1A0A075B644 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav13-1A0A075B644 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav13-1A0A075B644 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Trav13-1A0A075B644 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav13-1A0A075B644 Gm27322-201ENSMUST00000184007 104 ntBASIC19.14■□□□□ 0.65
Trav13-1A0A075B644 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav13-1A0A075B644 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav13-1A0A075B644 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav13-1A0A075B644 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav13-1A0A075B644 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav13-1A0A075B644 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trav13-1A0A075B644 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav13-1A0A075B644 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav13-1A0A075B644 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.95■□□□□ 0.62
Trav13-1A0A075B644 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav13-1A0A075B644 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trav13-1A0A075B644 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trav13-1A0A075B644 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav13-1A0A075B644 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav13-1A0A075B644 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav13-1A0A075B644 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav13-1A0A075B644 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav13-1A0A075B644 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.87■□□□□ 0.61
Trav13-1A0A075B644 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav13-1A0A075B644 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav13-1A0A075B644 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trav13-1A0A075B644 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav13-1A0A075B644 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav13-1A0A075B644 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trav13-1A0A075B644 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.79■□□□□ 0.6
Trav13-1A0A075B644 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.79■□□□□ 0.6
Trav13-1A0A075B644 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav13-1A0A075B644 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav13-1A0A075B644 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav13-1A0A075B644 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.76■□□□□ 0.59
Trav13-1A0A075B644 Gm24804-201ENSMUST00000174982 85 ntBASIC18.76■□□□□ 0.59
Trav13-1A0A075B644 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav13-1A0A075B644 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13-1A0A075B644 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.74■□□□□ 0.59
Trav13-1A0A075B644 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13-1A0A075B644 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.73■□□□□ 0.59
Trav13-1A0A075B644 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav13-1A0A075B644 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav13-1A0A075B644 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav13-1A0A075B644 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav13-1A0A075B644 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.65■□□□□ 0.58
Trav13-1A0A075B644 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav13-1A0A075B644 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13-1A0A075B644 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trav13-1A0A075B644 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13-1A0A075B644 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13-1A0A075B644 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13-1A0A075B644 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav13-1A0A075B644 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav13-1A0A075B644 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav13-1A0A075B644 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav13-1A0A075B644 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trav13-1A0A075B644 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav13-1A0A075B644 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav13-1A0A075B644 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav13-1A0A075B644 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav13-1A0A075B644 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav13-1A0A075B644 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav13-1A0A075B644 Mipep-204ENSMUST00000225043 1548 ntBASIC18.48■□□□□ 0.55
Trav13-1A0A075B644 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav13-1A0A075B644 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav13-1A0A075B644 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13-1A0A075B644 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav13-1A0A075B644 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav13-1A0A075B644 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav13-1A0A075B644 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trav13-1A0A075B644 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav13-1A0A075B644 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav13-1A0A075B644 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms