Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trav10A0A075B642 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trav10A0A075B642 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trav10A0A075B642 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Trav10A0A075B642 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trav10A0A075B642 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.45■■□□□ 1.5
Trav10A0A075B642 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trav10A0A075B642 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.41■■□□□ 1.5
Trav10A0A075B642 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trav10A0A075B642 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trav10A0A075B642 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trav10A0A075B642 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trav10A0A075B642 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Trav10A0A075B642 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trav10A0A075B642 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Trav10A0A075B642 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Trav10A0A075B642 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.21■■□□□ 1.47
Trav10A0A075B642 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trav10A0A075B642 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trav10A0A075B642 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.18■■□□□ 1.46
Trav10A0A075B642 Gm25262-201ENSMUST00000174934 133 ntBASIC24.18■■□□□ 1.46
Trav10A0A075B642 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.17■■□□□ 1.46
Trav10A0A075B642 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Trav10A0A075B642 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Trav10A0A075B642 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Trav10A0A075B642 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Trav10A0A075B642 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trav10A0A075B642 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Trav10A0A075B642 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Trav10A0A075B642 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Trav10A0A075B642 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.05■■□□□ 1.44
Trav10A0A075B642 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trav10A0A075B642 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trav10A0A075B642 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trav10A0A075B642 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trav10A0A075B642 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.98■■□□□ 1.43
Trav10A0A075B642 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Trav10A0A075B642 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trav10A0A075B642 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trav10A0A075B642 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trav10A0A075B642 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trav10A0A075B642 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trav10A0A075B642 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trav10A0A075B642 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trav10A0A075B642 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trav10A0A075B642 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trav10A0A075B642 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.76■■□□□ 1.39
Trav10A0A075B642 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trav10A0A075B642 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trav10A0A075B642 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Trav10A0A075B642 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Trav10A0A075B642 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trav10A0A075B642 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.68■■□□□ 1.38
Trav10A0A075B642 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.68■■□□□ 1.38
Trav10A0A075B642 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Trav10A0A075B642 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trav10A0A075B642 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trav10A0A075B642 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.63■■□□□ 1.37
Trav10A0A075B642 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trav10A0A075B642 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trav10A0A075B642 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.61■■□□□ 1.37
Trav10A0A075B642 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Trav10A0A075B642 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Trav10A0A075B642 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Trav10A0A075B642 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trav10A0A075B642 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trav10A0A075B642 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trav10A0A075B642 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Trav10A0A075B642 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trav10A0A075B642 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trav10A0A075B642 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Trav10A0A075B642 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.48■■□□□ 1.35
Trav10A0A075B642 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Trav10A0A075B642 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
Trav10A0A075B642 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.45■■□□□ 1.34
Trav10A0A075B642 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Trav10A0A075B642 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trav10A0A075B642 Gm27322-201ENSMUST00000184007 104 ntBASIC23.43■■□□□ 1.34
Trav10A0A075B642 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.42■■□□□ 1.34
Trav10A0A075B642 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trav10A0A075B642 Gm26115-201ENSMUST00000175605 87 ntBASIC23.39■■□□□ 1.33
Trav10A0A075B642 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trav10A0A075B642 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trav10A0A075B642 Mipep-204ENSMUST00000225043 1548 ntBASIC23.38■■□□□ 1.33
Trav10A0A075B642 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trav10A0A075B642 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
Trav10A0A075B642 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Trav10A0A075B642 Gm8109-201ENSMUST00000194076 746 ntBASIC23.35■■□□□ 1.33
Trav10A0A075B642 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trav10A0A075B642 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trav10A0A075B642 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trav10A0A075B642 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trav10A0A075B642 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trav10A0A075B642 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trav10A0A075B642 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trav10A0A075B642 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.3■■□□□ 1.32
Trav10A0A075B642 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.29■■□□□ 1.32
Trav10A0A075B642 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trav10A0A075B642 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.27■■□□□ 1.32
Trav10A0A075B642 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.23■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms