Protein–RNA interactions for Protein: A0A075B607

Trav14-3, T cell receptor alpha variable 14-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14-3A0A075B607 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20,21■□□□□ 0,83
Trav14-3A0A075B607 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20,2■□□□□ 0,82
Trav14-3A0A075B607 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20,18■□□□□ 0,82
Trav14-3A0A075B607 Gm24109-201ENSMUST00000175489 103 ntBASIC20,17■□□□□ 0,82
Trav14-3A0A075B607 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20,16■□□□□ 0,82
Trav14-3A0A075B607 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20,16■□□□□ 0,82
Trav14-3A0A075B607 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20,14■□□□□ 0,81
Trav14-3A0A075B607 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20,14■□□□□ 0,81
Trav14-3A0A075B607 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20,13■□□□□ 0,81
Trav14-3A0A075B607 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20,11■□□□□ 0,81
Trav14-3A0A075B607 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20,09■□□□□ 0,81
Trav14-3A0A075B607 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20,08■□□□□ 0,81
Trav14-3A0A075B607 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20,07■□□□□ 0,8
Trav14-3A0A075B607 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20,07■□□□□ 0,8
Trav14-3A0A075B607 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20,06■□□□□ 0,8
Trav14-3A0A075B607 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20,04■□□□□ 0,8
Trav14-3A0A075B607 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20,02■□□□□ 0,8
Trav14-3A0A075B607 Gm2415-204ENSMUST00000190235 2004 ntBASIC20,02■□□□□ 0,79
Trav14-3A0A075B607 Gm23366-201ENSMUST00000175022 89 ntBASIC20,01■□□□□ 0,79
Trav14-3A0A075B607 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20,01■□□□□ 0,79
Trav14-3A0A075B607 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0,79
Trav14-3A0A075B607 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20■□□□□ 0,79
Trav14-3A0A075B607 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19,98■□□□□ 0,79
Trav14-3A0A075B607 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19,89■□□□□ 0,77
Trav14-3A0A075B607 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19,89■□□□□ 0,77
Trav14-3A0A075B607 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19,89■□□□□ 0,77
Trav14-3A0A075B607 Zxda-201ENSMUST00000117281 2621 ntBASIC19,87■□□□□ 0,77
Trav14-3A0A075B607 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19,87■□□□□ 0,77
Trav14-3A0A075B607 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19,86■□□□□ 0,77
Trav14-3A0A075B607 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19,86■□□□□ 0,77
Trav14-3A0A075B607 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19,85■□□□□ 0,77
Trav14-3A0A075B607 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19,83■□□□□ 0,76
Trav14-3A0A075B607 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19,83■□□□□ 0,76
Trav14-3A0A075B607 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19,82■□□□□ 0,76
Trav14-3A0A075B607 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19,81■□□□□ 0,76
Trav14-3A0A075B607 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19,81■□□□□ 0,76
Trav14-3A0A075B607 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19,8■□□□□ 0,76
Trav14-3A0A075B607 Gm6658-202ENSMUST00000209493 1885 ntBASIC19,78■□□□□ 0,76
Trav14-3A0A075B607 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19,77■□□□□ 0,76
Trav14-3A0A075B607 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19,77■□□□□ 0,76
Trav14-3A0A075B607 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Trav14-3A0A075B607 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Trav14-3A0A075B607 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Trav14-3A0A075B607 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19,74■□□□□ 0,75
Trav14-3A0A075B607 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19,73■□□□□ 0,75
Trav14-3A0A075B607 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19,73■□□□□ 0,75
Trav14-3A0A075B607 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19,71■□□□□ 0,75
Trav14-3A0A075B607 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19,71■□□□□ 0,75
Trav14-3A0A075B607 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19,71■□□□□ 0,75
Trav14-3A0A075B607 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19,69■□□□□ 0,74
Trav14-3A0A075B607 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19,69■□□□□ 0,74
Trav14-3A0A075B607 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19,69■□□□□ 0,74
Trav14-3A0A075B607 Gm9905-201ENSMUST00000065740 1845 ntBASIC19,68■□□□□ 0,74
Trav14-3A0A075B607 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19,68■□□□□ 0,74
Trav14-3A0A075B607 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19,68■□□□□ 0,74
Trav14-3A0A075B607 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Trav14-3A0A075B607 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Trav14-3A0A075B607 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19,64■□□□□ 0,74
Trav14-3A0A075B607 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
Trav14-3A0A075B607 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19,61■□□□□ 0,73
Trav14-3A0A075B607 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19,61■□□□□ 0,73
Trav14-3A0A075B607 Gm6206-201ENSMUST00000133472 2199 ntBASIC19,6■□□□□ 0,73
Trav14-3A0A075B607 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19,59■□□□□ 0,73
Trav14-3A0A075B607 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19,59■□□□□ 0,73
Trav14-3A0A075B607 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19,59■□□□□ 0,73
Trav14-3A0A075B607 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19,58■□□□□ 0,72
Trav14-3A0A075B607 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19,58■□□□□ 0,72
Trav14-3A0A075B607 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19,57■□□□□ 0,72
Trav14-3A0A075B607 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19,56■□□□□ 0,72
Trav14-3A0A075B607 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19,53■□□□□ 0,72
Trav14-3A0A075B607 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19,52■□□□□ 0,72
Trav14-3A0A075B607 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19,51■□□□□ 0,71
Trav14-3A0A075B607 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19,51■□□□□ 0,71
Trav14-3A0A075B607 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19,5■□□□□ 0,71
Trav14-3A0A075B607 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19,49■□□□□ 0,71
Trav14-3A0A075B607 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19,49■□□□□ 0,71
Trav14-3A0A075B607 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19,47■□□□□ 0,71
Trav14-3A0A075B607 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19,47■□□□□ 0,71
Trav14-3A0A075B607 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19,46■□□□□ 0,71
Trav14-3A0A075B607 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19,45■□□□□ 0,7
Trav14-3A0A075B607 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19,45■□□□□ 0,7
Trav14-3A0A075B607 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19,43■□□□□ 0,7
Trav14-3A0A075B607 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19,41■□□□□ 0,7
Trav14-3A0A075B607 Zfp131-207ENSMUST00000224946 1783 ntBASIC19,41■□□□□ 0,7
Trav14-3A0A075B607 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19,4■□□□□ 0,7
Trav14-3A0A075B607 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19,4■□□□□ 0,7
Trav14-3A0A075B607 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19,4■□□□□ 0,7
Trav14-3A0A075B607 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19,4■□□□□ 0,7
Trav14-3A0A075B607 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19,4■□□□□ 0,7
Trav14-3A0A075B607 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19,39■□□□□ 0,69
Trav14-3A0A075B607 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19,37■□□□□ 0,69
Trav14-3A0A075B607 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19,37■□□□□ 0,69
Trav14-3A0A075B607 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19,37■□□□□ 0,69
Trav14-3A0A075B607 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19,36■□□□□ 0,69
Trav14-3A0A075B607 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19,36■□□□□ 0,69
Trav14-3A0A075B607 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19,34■□□□□ 0,69
Trav14-3A0A075B607 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19,34■□□□□ 0,69
Trav14-3A0A075B607 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19,34■□□□□ 0,69
Trav14-3A0A075B607 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19,33■□□□□ 0,69
Trav14-3A0A075B607 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19,33■□□□□ 0,68
Retrieved 100 of 76,532 protein–RNA pairs in 28,4 ms