Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ighv1-54A0A075B5W5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.98■■□□□ 1.59
Ighv1-54A0A075B5W5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Ighv1-54A0A075B5W5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Ighv1-54A0A075B5W5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ighv1-54A0A075B5W5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ighv1-54A0A075B5W5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Ighv1-54A0A075B5W5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ighv1-54A0A075B5W5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ighv1-54A0A075B5W5 Gm25262-201ENSMUST00000174934 133 ntBASIC24.83■■□□□ 1.57
Ighv1-54A0A075B5W5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.81■■□□□ 1.56
Ighv1-54A0A075B5W5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ighv1-54A0A075B5W5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.73■■□□□ 1.55
Ighv1-54A0A075B5W5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ighv1-54A0A075B5W5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.72■■□□□ 1.55
Ighv1-54A0A075B5W5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ighv1-54A0A075B5W5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ighv1-54A0A075B5W5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ighv1-54A0A075B5W5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ighv1-54A0A075B5W5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Ighv1-54A0A075B5W5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ighv1-54A0A075B5W5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ighv1-54A0A075B5W5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ighv1-54A0A075B5W5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ighv1-54A0A075B5W5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ighv1-54A0A075B5W5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ighv1-54A0A075B5W5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ighv1-54A0A075B5W5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ighv1-54A0A075B5W5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ighv1-54A0A075B5W5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ighv1-54A0A075B5W5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ighv1-54A0A075B5W5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.51■■□□□ 1.51
Ighv1-54A0A075B5W5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ighv1-54A0A075B5W5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ighv1-54A0A075B5W5 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.46■■□□□ 1.51
Ighv1-54A0A075B5W5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ighv1-54A0A075B5W5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ighv1-54A0A075B5W5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.39■■□□□ 1.49
Ighv1-54A0A075B5W5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ighv1-54A0A075B5W5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Ighv1-54A0A075B5W5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.31■■□□□ 1.48
Ighv1-54A0A075B5W5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ighv1-54A0A075B5W5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.27■■□□□ 1.48
Ighv1-54A0A075B5W5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ighv1-54A0A075B5W5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ighv1-54A0A075B5W5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ighv1-54A0A075B5W5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.24■■□□□ 1.47
Ighv1-54A0A075B5W5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Ighv1-54A0A075B5W5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ighv1-54A0A075B5W5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ighv1-54A0A075B5W5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ighv1-54A0A075B5W5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ighv1-54A0A075B5W5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ighv1-54A0A075B5W5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ighv1-54A0A075B5W5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ighv1-54A0A075B5W5 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.12■■□□□ 1.45
Ighv1-54A0A075B5W5 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.11■■□□□ 1.45
Ighv1-54A0A075B5W5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ighv1-54A0A075B5W5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ighv1-54A0A075B5W5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ighv1-54A0A075B5W5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ighv1-54A0A075B5W5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ighv1-54A0A075B5W5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Ighv1-54A0A075B5W5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ighv1-54A0A075B5W5 Gm26115-201ENSMUST00000175605 87 ntBASIC24.03■■□□□ 1.44
Ighv1-54A0A075B5W5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Ighv1-54A0A075B5W5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ighv1-54A0A075B5W5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Ighv1-54A0A075B5W5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Ighv1-54A0A075B5W5 Gm27322-201ENSMUST00000184007 104 ntBASIC24■■□□□ 1.43
Ighv1-54A0A075B5W5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ighv1-54A0A075B5W5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ighv1-54A0A075B5W5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ighv1-54A0A075B5W5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
Ighv1-54A0A075B5W5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.98■■□□□ 1.43
Ighv1-54A0A075B5W5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ighv1-54A0A075B5W5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
Ighv1-54A0A075B5W5 Gm8109-201ENSMUST00000194076 746 ntBASIC23.95■■□□□ 1.42
Ighv1-54A0A075B5W5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ighv1-54A0A075B5W5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ighv1-54A0A075B5W5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.86■■□□□ 1.41
Ighv1-54A0A075B5W5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ighv1-54A0A075B5W5 Mipep-204ENSMUST00000225043 1548 ntBASIC23.84■■□□□ 1.41
Ighv1-54A0A075B5W5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ighv1-54A0A075B5W5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ighv1-54A0A075B5W5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ighv1-54A0A075B5W5 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.81■■□□□ 1.4
Ighv1-54A0A075B5W5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ighv1-54A0A075B5W5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ighv1-54A0A075B5W5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Ighv1-54A0A075B5W5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.73■■□□□ 1.39
Ighv1-54A0A075B5W5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ighv1-54A0A075B5W5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ighv1-54A0A075B5W5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ighv1-54A0A075B5W5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.68■■□□□ 1.38
Ighv1-54A0A075B5W5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.67■■□□□ 1.38
Ighv1-54A0A075B5W5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ighv1-54A0A075B5W5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ighv1-54A0A075B5W5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ighv1-54A0A075B5W5 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 7.5 ms