Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBE2OQ9C0C9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBE2OQ9C0C9 AL589702.1-201ENST00000641229 1509 ntBASIC17.58■□□□□ 0.41
UBE2OQ9C0C9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBE2OQ9C0C9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBE2OQ9C0C9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
UBE2OQ9C0C9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.58■□□□□ 0.41
UBE2OQ9C0C9 AL118508.1-201ENST00000613502 2345 ntBASIC17.58■□□□□ 0.41
UBE2OQ9C0C9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 AC005077.2-201ENST00000449786 690 ntBASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 EIF4HP1-201ENST00000453115 687 ntBASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBE2OQ9C0C9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 AL671710.1-201ENST00000610245 2349 ntBASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 BTBD6P1-201ENST00000412176 1267 ntBASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 AC244669.2-201ENST00000612320 853 ntBASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 AC128714.1-201ENST00000637035 887 ntBASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 AC008687.7-202ENST00000637404 953 ntBASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UBE2OQ9C0C9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms