Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.91■□□□□ 0.3
RAD9AQ99638 AC078819.1-201ENST00000547454 765 ntBASIC16.91■□□□□ 0.3
RAD9AQ99638 AC012085.1-201ENST00000548270 765 ntBASIC16.91■□□□□ 0.3
RAD9AQ99638 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.91■□□□□ 0.3
RAD9AQ99638 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.91■□□□□ 0.3
RAD9AQ99638 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.91■□□□□ 0.3
RAD9AQ99638 AC132938.4-201ENST00000623835 848 ntBASIC16.91■□□□□ 0.3
RAD9AQ99638 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 REXO1L1P-202ENST00000608646 1974 ntBASIC16.91■□□□□ 0.3
RAD9AQ99638 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
RAD9AQ99638 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.91■□□□□ 0.3
RAD9AQ99638 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
RAD9AQ99638 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAD9AQ99638 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.9■□□□□ 0.3
RAD9AQ99638 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RAD9AQ99638 AL645608.8-201ENST00000606034 2086 ntBASIC16.9■□□□□ 0.3
RAD9AQ99638 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RAD9AQ99638 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.9■□□□□ 0.3
RAD9AQ99638 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RAD9AQ99638 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.9■□□□□ 0.3
RAD9AQ99638 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
RAD9AQ99638 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.9■□□□□ 0.3
RAD9AQ99638 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.9■□□□□ 0.3
RAD9AQ99638 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.9■□□□□ 0.3
RAD9AQ99638 AC004898.1-201ENST00000451057 766 ntBASIC16.9■□□□□ 0.3
RAD9AQ99638 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.9■□□□□ 0.3
RAD9AQ99638 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.9■□□□□ 0.3
RAD9AQ99638 AP001582.1-201ENST00000525856 295 ntBASIC16.9■□□□□ 0.3
RAD9AQ99638 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.9■□□□□ 0.3
RAD9AQ99638 HNRNPUP1-201ENST00000554987 333 ntBASIC16.9■□□□□ 0.3
RAD9AQ99638 AP005019.2-201ENST00000615104 511 ntBASIC16.9■□□□□ 0.3
RAD9AQ99638 AC138951.2-201ENST00000623455 1161 ntBASIC16.9■□□□□ 0.3
RAD9AQ99638 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RAD9AQ99638 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 AC138028.6-201ENST00000616106 1482 ntBASIC16.9■□□□□ 0.3
RAD9AQ99638 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 AC012313.1-201ENST00000593393 3059 ntBASIC16.9■□□□□ 0.3
RAD9AQ99638 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RAD9AQ99638 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAD9AQ99638 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.9■□□□□ 0.3
RAD9AQ99638 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAD9AQ99638 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RAD9AQ99638 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RAD9AQ99638 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.89■□□□□ 0.29
RAD9AQ99638 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.89■□□□□ 0.29
RAD9AQ99638 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.89■□□□□ 0.29
RAD9AQ99638 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.89■□□□□ 0.29
RAD9AQ99638 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RAD9AQ99638 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.89■□□□□ 0.29
RAD9AQ99638 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
RAD9AQ99638 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RAD9AQ99638 KRT18P25-201ENST00000508931 1278 ntBASIC16.89■□□□□ 0.29
RAD9AQ99638 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.89■□□□□ 0.29
RAD9AQ99638 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.89■□□□□ 0.29
RAD9AQ99638 MIR4741-201ENST00000579822 90 ntBASIC16.89■□□□□ 0.29
RAD9AQ99638 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.89■□□□□ 0.29
RAD9AQ99638 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAD9AQ99638 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.89■□□□□ 0.29
RAD9AQ99638 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.89■□□□□ 0.29
RAD9AQ99638 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms